Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HCFC1P51610 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HCFC1P51610 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.55■□□□□ 0.88
HCFC1P51610 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.55■□□□□ 0.88
HCFC1P51610 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.55■□□□□ 0.88
HCFC1P51610 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HCFC1P51610 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
HCFC1P51610 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.54■□□□□ 0.88
HCFC1P51610 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
HCFC1P51610 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.54■□□□□ 0.88
HCFC1P51610 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HCFC1P51610 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HCFC1P51610 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.54■□□□□ 0.88
HCFC1P51610 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HCFC1P51610 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HCFC1P51610 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.54■□□□□ 0.88
HCFC1P51610 AL031432.3-201ENST00000607698 485 ntBASIC20.54■□□□□ 0.88
HCFC1P51610 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
HCFC1P51610 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.53■□□□□ 0.88
HCFC1P51610 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC1P51610 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.53■□□□□ 0.88
HCFC1P51610 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC1P51610 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
HCFC1P51610 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HCFC1P51610 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
HCFC1P51610 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HCFC1P51610 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HCFC1P51610 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.52■□□□□ 0.88
HCFC1P51610 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
HCFC1P51610 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HCFC1P51610 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
HCFC1P51610 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC1P51610 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC1P51610 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
HCFC1P51610 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
HCFC1P51610 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.51■□□□□ 0.87
HCFC1P51610 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
HCFC1P51610 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC1P51610 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC1P51610 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC1P51610 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC1P51610 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HCFC1P51610 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.51■□□□□ 0.87
HCFC1P51610 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.51■□□□□ 0.87
HCFC1P51610 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.51■□□□□ 0.87
HCFC1P51610 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.51■□□□□ 0.87
HCFC1P51610 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
HCFC1P51610 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HCFC1P51610 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC1P51610 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC1P51610 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.5■□□□□ 0.87
HCFC1P51610 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC1P51610 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.5■□□□□ 0.87
HCFC1P51610 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC1P51610 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
HCFC1P51610 FOXO3B-201ENST00000395675 1928 ntBASIC20.5■□□□□ 0.87
HCFC1P51610 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.5■□□□□ 0.87
HCFC1P51610 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
HCFC1P51610 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HCFC1P51610 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.49■□□□□ 0.87
HCFC1P51610 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
HCFC1P51610 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
HCFC1P51610 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
HCFC1P51610 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.48■□□□□ 0.87
HCFC1P51610 PBX2P1-201ENST00000493219 1291 ntBASIC20.48■□□□□ 0.87
HCFC1P51610 AC142381.2-201ENST00000566120 298 ntBASIC20.48■□□□□ 0.87
HCFC1P51610 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
HCFC1P51610 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.48■□□□□ 0.87
HCFC1P51610 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
HCFC1P51610 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
HCFC1P51610 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.47■□□□□ 0.87
HCFC1P51610 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
HCFC1P51610 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.47■□□□□ 0.87
HCFC1P51610 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.46■□□□□ 0.87
HCFC1P51610 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
HCFC1P51610 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
HCFC1P51610 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
HCFC1P51610 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
HCFC1P51610 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
HCFC1P51610 AC135279.3-201ENST00000610945 1311 ntBASIC20.45■□□□□ 0.86
HCFC1P51610 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HCFC1P51610 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
HCFC1P51610 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.45■□□□□ 0.86
HCFC1P51610 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
HCFC1P51610 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.45■□□□□ 0.86
HCFC1P51610 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.45■□□□□ 0.86
HCFC1P51610 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HCFC1P51610 UNC93B3-201ENST00000308076 687 ntBASIC20.44■□□□□ 0.86
HCFC1P51610 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HCFC1P51610 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HCFC1P51610 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.44■□□□□ 0.86
HCFC1P51610 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
HCFC1P51610 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.44■□□□□ 0.86
HCFC1P51610 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC1P51610 MIR6722-201ENST00000617286 78 ntBASIC20.43■□□□□ 0.86
HCFC1P51610 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC1P51610 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC20.43■□□□□ 0.86
HCFC1P51610 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC1P51610 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
HCFC1P51610 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms