Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SDHAP31040 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
SDHAP31040 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.89■□□□□ 0.93
SDHAP31040 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.89■□□□□ 0.93
SDHAP31040 AC004812.2-201ENST00000611079 2094 ntBASIC20.89■□□□□ 0.93
SDHAP31040 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SDHAP31040 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC20.88■□□□□ 0.93
SDHAP31040 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.88■□□□□ 0.93
SDHAP31040 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SDHAP31040 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SDHAP31040 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SDHAP31040 RARRES2P2-201ENST00000394842 485 ntBASIC20.88■□□□□ 0.93
SDHAP31040 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.88■□□□□ 0.93
SDHAP31040 SPCS2P3-201ENST00000500401 656 ntBASIC20.88■□□□□ 0.93
SDHAP31040 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SDHAP31040 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.87■□□□□ 0.93
SDHAP31040 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SDHAP31040 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.87■□□□□ 0.93
SDHAP31040 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.87■□□□□ 0.93
SDHAP31040 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SDHAP31040 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.87■□□□□ 0.93
SDHAP31040 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.86■□□□□ 0.93
SDHAP31040 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SDHAP31040 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SDHAP31040 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SDHAP31040 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SDHAP31040 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SDHAP31040 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SDHAP31040 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SDHAP31040 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SDHAP31040 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SDHAP31040 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.85■□□□□ 0.93
SDHAP31040 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SDHAP31040 MIR6765-201ENST00000614092 87 ntBASIC20.85■□□□□ 0.93
SDHAP31040 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SDHAP31040 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SDHAP31040 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SDHAP31040 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SDHAP31040 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SDHAP31040 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SDHAP31040 AC087393.1-201ENST00000582896 145 ntBASIC20.84■□□□□ 0.93
SDHAP31040 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SDHAP31040 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.84■□□□□ 0.93
SDHAP31040 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SDHAP31040 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
SDHAP31040 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
SDHAP31040 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SDHAP31040 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.83■□□□□ 0.93
SDHAP31040 HSD17B1P1-201ENST00000590052 955 ntBASIC20.83■□□□□ 0.93
SDHAP31040 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SDHAP31040 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.83■□□□□ 0.92
SDHAP31040 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SDHAP31040 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
SDHAP31040 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SDHAP31040 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.82■□□□□ 0.92
SDHAP31040 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SDHAP31040 DUX4L9-201ENST00000449051 1259 ntBASIC20.82■□□□□ 0.92
SDHAP31040 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.82■□□□□ 0.92
SDHAP31040 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SDHAP31040 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SDHAP31040 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SDHAP31040 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SDHAP31040 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SDHAP31040 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SDHAP31040 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SDHAP31040 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SDHAP31040 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.81■□□□□ 0.92
SDHAP31040 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SDHAP31040 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SDHAP31040 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.81■□□□□ 0.92
SDHAP31040 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.8■□□□□ 0.92
SDHAP31040 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SDHAP31040 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
SDHAP31040 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SDHAP31040 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
SDHAP31040 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.8■□□□□ 0.92
SDHAP31040 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SDHAP31040 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
SDHAP31040 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.8■□□□□ 0.92
SDHAP31040 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SDHAP31040 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
SDHAP31040 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SDHAP31040 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SDHAP31040 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SDHAP31040 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.79■□□□□ 0.92
SDHAP31040 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SDHAP31040 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SDHAP31040 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SDHAP31040 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
SDHAP31040 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.79■□□□□ 0.92
SDHAP31040 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SDHAP31040 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.79■□□□□ 0.92
SDHAP31040 ABCB10P4-201ENST00000566803 2184 ntBASIC20.79■□□□□ 0.92
SDHAP31040 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SDHAP31040 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SDHAP31040 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
SDHAP31040 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.78■□□□□ 0.92
SDHAP31040 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SDHAP31040 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.78■□□□□ 0.92
SDHAP31040 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms