Protein–RNA interactions for Protein: P19623

SRM, Spermidine synthase, humanhuman

Predictions only

Length 302 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP19623 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRMP19623 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRMP19623 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SRMP19623 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.32■□□□□ 0.84
SRMP19623 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.32■□□□□ 0.84
SRMP19623 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRMP19623 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SRMP19623 ZNRF2P2-203ENST00000454624 420 ntBASIC20.32■□□□□ 0.84
SRMP19623 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.32■□□□□ 0.84
SRMP19623 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRMP19623 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRMP19623 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRMP19623 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SRMP19623 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRMP19623 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRMP19623 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SRMP19623 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRMP19623 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRMP19623 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRMP19623 AC025884.2-201ENST00000553429 711 ntBASIC20.31■□□□□ 0.84
SRMP19623 MIR3960-201ENST00000583311 91 ntBASIC20.31■□□□□ 0.84
SRMP19623 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SRMP19623 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SRMP19623 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SRMP19623 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRMP19623 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRMP19623 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRMP19623 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.3■□□□□ 0.84
SRMP19623 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SRMP19623 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRMP19623 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRMP19623 RPS2P35-201ENST00000443417 897 ntBASIC20.3■□□□□ 0.84
SRMP19623 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SRMP19623 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.3■□□□□ 0.84
SRMP19623 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRMP19623 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SRMP19623 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SRMP19623 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SRMP19623 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRMP19623 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRMP19623 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.29■□□□□ 0.84
SRMP19623 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SRMP19623 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SRMP19623 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.29■□□□□ 0.84
SRMP19623 CR559946.2-201ENST00000623684 991 ntBASIC20.29■□□□□ 0.84
SRMP19623 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SRMP19623 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SRMP19623 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SRMP19623 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SRMP19623 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.28■□□□□ 0.84
SRMP19623 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRMP19623 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SRMP19623 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.28■□□□□ 0.84
SRMP19623 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.28■□□□□ 0.84
SRMP19623 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SRMP19623 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SRMP19623 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.28■□□□□ 0.84
SRMP19623 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SRMP19623 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
SRMP19623 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SRMP19623 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SRMP19623 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRMP19623 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
SRMP19623 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRMP19623 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SRMP19623 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.27■□□□□ 0.84
SRMP19623 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SRMP19623 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SRMP19623 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRMP19623 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRMP19623 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRMP19623 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRMP19623 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.26■□□□□ 0.83
SRMP19623 AL157400.5-201ENST00000507624 621 ntBASIC20.26■□□□□ 0.83
SRMP19623 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.26■□□□□ 0.83
SRMP19623 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.26■□□□□ 0.83
SRMP19623 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.26■□□□□ 0.83
SRMP19623 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SRMP19623 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRMP19623 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRMP19623 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
SRMP19623 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.25■□□□□ 0.83
SRMP19623 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
SRMP19623 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.25■□□□□ 0.83
SRMP19623 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRMP19623 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.25■□□□□ 0.83
SRMP19623 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SRMP19623 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SRMP19623 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SRMP19623 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.25■□□□□ 0.83
SRMP19623 SMPD5-203ENST00000639008 1464 ntBASIC20.24■□□□□ 0.83
SRMP19623 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SRMP19623 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SRMP19623 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SRMP19623 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.24■□□□□ 0.83
SRMP19623 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.24■□□□□ 0.83
SRMP19623 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SRMP19623 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.24■□□□□ 0.83
SRMP19623 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
SRMP19623 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms