Protein–RNA interactions for Protein: P0DKX0

ZNF728, Zinc finger protein 728, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF728P0DKX0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF728P0DKX0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF728P0DKX0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.74■□□□□ 0.75
ZNF728P0DKX0 KRT18P60-201ENST00000312876 1297 ntBASIC19.74■□□□□ 0.75
ZNF728P0DKX0 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF728P0DKX0 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
ZNF728P0DKX0 AC018755.3-202ENST00000596210 929 ntBASIC19.74■□□□□ 0.75
ZNF728P0DKX0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF728P0DKX0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ZNF728P0DKX0 AC133561.1-201ENST00000568600 2415 ntBASIC19.74■□□□□ 0.75
ZNF728P0DKX0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF728P0DKX0 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF728P0DKX0 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ZNF728P0DKX0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
ZNF728P0DKX0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF728P0DKX0 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF728P0DKX0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ZNF728P0DKX0 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ZNF728P0DKX0 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF728P0DKX0 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF728P0DKX0 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.72■□□□□ 0.75
ZNF728P0DKX0 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC19.72■□□□□ 0.75
ZNF728P0DKX0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF728P0DKX0 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
ZNF728P0DKX0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ZNF728P0DKX0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNF728P0DKX0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF728P0DKX0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF728P0DKX0 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.71■□□□□ 0.75
ZNF728P0DKX0 AC141586.4-201ENST00000624558 1573 ntBASIC19.71■□□□□ 0.75
ZNF728P0DKX0 AC012676.1-201ENST00000574705 1949 ntBASIC19.71■□□□□ 0.75
ZNF728P0DKX0 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF728P0DKX0 AC129492.7-201ENST00000622992 756 ntBASIC19.71■□□□□ 0.75
ZNF728P0DKX0 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.71■□□□□ 0.75
ZNF728P0DKX0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF728P0DKX0 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ZNF728P0DKX0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNF728P0DKX0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.71■□□□□ 0.75
ZNF728P0DKX0 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ZNF728P0DKX0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF728P0DKX0 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.7■□□□□ 0.74
ZNF728P0DKX0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
ZNF728P0DKX0 DUX4L9-201ENST00000449051 1259 ntBASIC19.7■□□□□ 0.74
ZNF728P0DKX0 SPCS2P3-201ENST00000500401 656 ntBASIC19.7■□□□□ 0.74
ZNF728P0DKX0 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF728P0DKX0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ZNF728P0DKX0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF728P0DKX0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF728P0DKX0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF728P0DKX0 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
ZNF728P0DKX0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ZNF728P0DKX0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF728P0DKX0 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.69■□□□□ 0.74
ZNF728P0DKX0 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
ZNF728P0DKX0 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF728P0DKX0 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF728P0DKX0 MIR6765-201ENST00000614092 87 ntBASIC19.69■□□□□ 0.74
ZNF728P0DKX0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF728P0DKX0 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF728P0DKX0 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF728P0DKX0 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ZNF728P0DKX0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.69■□□□□ 0.74
ZNF728P0DKX0 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.69■□□□□ 0.74
ZNF728P0DKX0 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF728P0DKX0 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ZNF728P0DKX0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF728P0DKX0 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF728P0DKX0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.68■□□□□ 0.74
ZNF728P0DKX0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ZNF728P0DKX0 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
ZNF728P0DKX0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF728P0DKX0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF728P0DKX0 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF728P0DKX0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF728P0DKX0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF728P0DKX0 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF728P0DKX0 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF728P0DKX0 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF728P0DKX0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF728P0DKX0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.67■□□□□ 0.74
ZNF728P0DKX0 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF728P0DKX0 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZNF728P0DKX0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
ZNF728P0DKX0 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF728P0DKX0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ZNF728P0DKX0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF728P0DKX0 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF728P0DKX0 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.66■□□□□ 0.74
ZNF728P0DKX0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.66■□□□□ 0.74
ZNF728P0DKX0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF728P0DKX0 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF728P0DKX0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF728P0DKX0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF728P0DKX0 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF728P0DKX0 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF728P0DKX0 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZNF728P0DKX0 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF728P0DKX0 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZNF728P0DKX0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ZNF728P0DKX0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms