Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
HOXC6P09630 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
HOXC6P09630 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC26.67■■□□□ 1.86
HOXC6P09630 RARRES2P6-201ENST00000567333 442 ntBASIC26.67■■□□□ 1.86
HOXC6P09630 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC26.67■■□□□ 1.86
HOXC6P09630 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
HOXC6P09630 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
HOXC6P09630 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
HOXC6P09630 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
HOXC6P09630 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
HOXC6P09630 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
HOXC6P09630 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
HOXC6P09630 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.66■■□□□ 1.86
HOXC6P09630 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
HOXC6P09630 LBH-205ENST00000407930 756 ntTSL 2 BASIC26.65■■□□□ 1.86
HOXC6P09630 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC26.65■■□□□ 1.86
HOXC6P09630 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC26.65■■□□□ 1.86
HOXC6P09630 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
HOXC6P09630 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC26.65■■□□□ 1.86
HOXC6P09630 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
HOXC6P09630 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.64■■□□□ 1.86
HOXC6P09630 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
HOXC6P09630 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
HOXC6P09630 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
HOXC6P09630 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
HOXC6P09630 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
HOXC6P09630 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC26.64■■□□□ 1.86
HOXC6P09630 AL136162.1-201ENST00000607711 1078 ntBASIC26.64■■□□□ 1.86
HOXC6P09630 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
HOXC6P09630 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.85
HOXC6P09630 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
HOXC6P09630 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
HOXC6P09630 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.64■■□□□ 1.85
HOXC6P09630 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
HOXC6P09630 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
HOXC6P09630 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
HOXC6P09630 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
HOXC6P09630 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
HOXC6P09630 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
HOXC6P09630 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC26.63■■□□□ 1.85
HOXC6P09630 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
HOXC6P09630 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.62■■□□□ 1.85
HOXC6P09630 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
HOXC6P09630 AC026271.2-201ENST00000428091 497 ntBASIC26.62■■□□□ 1.85
HOXC6P09630 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
HOXC6P09630 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC26.62■■□□□ 1.85
HOXC6P09630 AC135279.3-201ENST00000610945 1311 ntBASIC26.62■■□□□ 1.85
HOXC6P09630 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.62■■□□□ 1.85
HOXC6P09630 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
HOXC6P09630 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.61■■□□□ 1.85
HOXC6P09630 EDA-201ENST00000338901 1233 ntBASIC26.61■■□□□ 1.85
HOXC6P09630 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
HOXC6P09630 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.61■■□□□ 1.85
HOXC6P09630 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.61■■□□□ 1.85
HOXC6P09630 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
HOXC6P09630 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
HOXC6P09630 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.6■■□□□ 1.85
HOXC6P09630 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
HOXC6P09630 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
HOXC6P09630 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26.59■■□□□ 1.85
HOXC6P09630 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
HOXC6P09630 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC26.59■■□□□ 1.85
HOXC6P09630 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
HOXC6P09630 SRD5A1P1-201ENST00000442297 786 ntBASIC26.59■■□□□ 1.85
HOXC6P09630 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC26.59■■□□□ 1.85
HOXC6P09630 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
HOXC6P09630 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
HOXC6P09630 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC26.58■■□□□ 1.85
HOXC6P09630 AL355001.2-201ENST00000620617 1191 ntBASIC26.58■■□□□ 1.85
HOXC6P09630 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
HOXC6P09630 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
HOXC6P09630 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
HOXC6P09630 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC26.57■■□□□ 1.84
HOXC6P09630 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
HOXC6P09630 AC024257.2-201ENST00000549699 147 ntBASIC26.57■■□□□ 1.84
HOXC6P09630 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC26.56■■□□□ 1.84
HOXC6P09630 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
HOXC6P09630 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.56■■□□□ 1.84
HOXC6P09630 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
HOXC6P09630 GATM-206ENST00000558336 1522 ntTSL 2 BASIC26.55■■□□□ 1.84
HOXC6P09630 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
HOXC6P09630 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
HOXC6P09630 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
HOXC6P09630 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
HOXC6P09630 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
HOXC6P09630 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC26.55■■□□□ 1.84
HOXC6P09630 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
HOXC6P09630 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
HOXC6P09630 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
HOXC6P09630 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC26.54■■□□□ 1.84
HOXC6P09630 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC26.54■■□□□ 1.84
HOXC6P09630 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
HOXC6P09630 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.54■■□□□ 1.84
HOXC6P09630 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC26.54■■□□□ 1.84
HOXC6P09630 AL121749.1-202ENST00000609313 2153 ntBASIC26.53■■□□□ 1.84
HOXC6P09630 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
HOXC6P09630 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
HOXC6P09630 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
HOXC6P09630 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
HOXC6P09630 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms