Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HIST1H2ABP04908 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
HIST1H2ABP04908 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.15■□□□□ 0.98
HIST1H2ABP04908 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.15■□□□□ 0.98
HIST1H2ABP04908 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
HIST1H2ABP04908 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HIST1H2ABP04908 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.14■□□□□ 0.98
HIST1H2ABP04908 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.14■□□□□ 0.97
HIST1H2ABP04908 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.14■□□□□ 0.97
HIST1H2ABP04908 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.14■□□□□ 0.97
HIST1H2ABP04908 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
HIST1H2ABP04908 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HIST1H2ABP04908 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HIST1H2ABP04908 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HIST1H2ABP04908 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
HIST1H2ABP04908 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.13■□□□□ 0.97
HIST1H2ABP04908 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HIST1H2ABP04908 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HIST1H2ABP04908 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HIST1H2ABP04908 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HIST1H2ABP04908 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HIST1H2ABP04908 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HIST1H2ABP04908 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HIST1H2ABP04908 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HIST1H2ABP04908 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HIST1H2ABP04908 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HIST1H2ABP04908 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.12■□□□□ 0.97
HIST1H2ABP04908 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
HIST1H2ABP04908 U85056.1-201ENST00000616429 682 ntBASIC21.12■□□□□ 0.97
HIST1H2ABP04908 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.12■□□□□ 0.97
HIST1H2ABP04908 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HIST1H2ABP04908 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HIST1H2ABP04908 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIST1H2ABP04908 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIST1H2ABP04908 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIST1H2ABP04908 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.11■□□□□ 0.97
HIST1H2ABP04908 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.11■□□□□ 0.97
HIST1H2ABP04908 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.11■□□□□ 0.97
HIST1H2ABP04908 DUX4L9-201ENST00000449051 1259 ntBASIC21.11■□□□□ 0.97
HIST1H2ABP04908 SPCS2P3-201ENST00000500401 656 ntBASIC21.11■□□□□ 0.97
HIST1H2ABP04908 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HIST1H2ABP04908 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIST1H2ABP04908 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIST1H2ABP04908 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIST1H2ABP04908 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HIST1H2ABP04908 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HIST1H2ABP04908 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HIST1H2ABP04908 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.1■□□□□ 0.97
HIST1H2ABP04908 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HIST1H2ABP04908 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.1■□□□□ 0.97
HIST1H2ABP04908 AC141586.4-201ENST00000624558 1573 ntBASIC21.1■□□□□ 0.97
HIST1H2ABP04908 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
HIST1H2ABP04908 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HIST1H2ABP04908 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.09■□□□□ 0.97
HIST1H2ABP04908 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIST1H2ABP04908 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.09■□□□□ 0.97
HIST1H2ABP04908 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
HIST1H2ABP04908 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HIST1H2ABP04908 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.09■□□□□ 0.97
HIST1H2ABP04908 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HIST1H2ABP04908 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HIST1H2ABP04908 LINC00543-201ENST00000567234 1845 ntBASIC21.08■□□□□ 0.97
HIST1H2ABP04908 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HIST1H2ABP04908 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.08■□□□□ 0.97
HIST1H2ABP04908 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HIST1H2ABP04908 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HIST1H2ABP04908 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
HIST1H2ABP04908 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.08■□□□□ 0.97
HIST1H2ABP04908 AC087393.1-201ENST00000582896 145 ntBASIC21.08■□□□□ 0.97
HIST1H2ABP04908 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HIST1H2ABP04908 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HIST1H2ABP04908 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
HIST1H2ABP04908 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HIST1H2ABP04908 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIST1H2ABP04908 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HIST1H2ABP04908 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIST1H2ABP04908 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIST1H2ABP04908 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HIST1H2ABP04908 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIST1H2ABP04908 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.07■□□□□ 0.96
HIST1H2ABP04908 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIST1H2ABP04908 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIST1H2ABP04908 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIST1H2ABP04908 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HIST1H2ABP04908 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HIST1H2ABP04908 ABHD17AP5-201ENST00000580133 923 ntBASIC21.06■□□□□ 0.96
HIST1H2ABP04908 AC129492.7-201ENST00000622992 756 ntBASIC21.06■□□□□ 0.96
HIST1H2ABP04908 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIST1H2ABP04908 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIST1H2ABP04908 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HIST1H2ABP04908 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
HIST1H2ABP04908 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIST1H2ABP04908 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HIST1H2ABP04908 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
HIST1H2ABP04908 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIST1H2ABP04908 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.05■□□□□ 0.96
HIST1H2ABP04908 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
HIST1H2ABP04908 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIST1H2ABP04908 KRT18P60-201ENST00000312876 1297 ntBASIC21.05■□□□□ 0.96
HIST1H2ABP04908 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms