Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN1O95832 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC20.84■□□□□ 0.93
CLDN1O95832 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN1O95832 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
CLDN1O95832 AC011551.1-201ENST00000614101 683 ntBASIC20.84■□□□□ 0.93
CLDN1O95832 AL136967.2-201ENST00000623968 743 ntBASIC20.84■□□□□ 0.93
CLDN1O95832 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CLDN1O95832 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLDN1O95832 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
CLDN1O95832 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN1O95832 LINC01003-201ENST00000564834 1764 ntBASIC20.83■□□□□ 0.93
CLDN1O95832 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CLDN1O95832 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLDN1O95832 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.83■□□□□ 0.92
CLDN1O95832 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
CLDN1O95832 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLDN1O95832 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC20.83■□□□□ 0.92
CLDN1O95832 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN1O95832 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN1O95832 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.82■□□□□ 0.92
CLDN1O95832 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN1O95832 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN1O95832 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN1O95832 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN1O95832 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CLDN1O95832 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.82■□□□□ 0.92
CLDN1O95832 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CLDN1O95832 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN1O95832 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CLDN1O95832 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN1O95832 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLDN1O95832 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CLDN1O95832 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN1O95832 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.81■□□□□ 0.92
CLDN1O95832 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.81■□□□□ 0.92
CLDN1O95832 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN1O95832 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.81■□□□□ 0.92
CLDN1O95832 AF213884.3-201ENST00000563833 479 ntBASIC20.81■□□□□ 0.92
CLDN1O95832 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLDN1O95832 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
CLDN1O95832 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN1O95832 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN1O95832 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN1O95832 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLDN1O95832 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.8■□□□□ 0.92
CLDN1O95832 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
CLDN1O95832 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC20.8■□□□□ 0.92
CLDN1O95832 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN1O95832 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN1O95832 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN1O95832 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN1O95832 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN1O95832 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN1O95832 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.79■□□□□ 0.92
CLDN1O95832 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.79■□□□□ 0.92
CLDN1O95832 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN1O95832 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.79■□□□□ 0.92
CLDN1O95832 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN1O95832 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN1O95832 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CLDN1O95832 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLDN1O95832 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN1O95832 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN1O95832 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN1O95832 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.78■□□□□ 0.92
CLDN1O95832 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLDN1O95832 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.78■□□□□ 0.92
CLDN1O95832 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.78■□□□□ 0.92
CLDN1O95832 MIR939-201ENST00000401314 82 ntBASIC20.77■□□□□ 0.92
CLDN1O95832 AC090192.1-201ENST00000517740 490 ntBASIC20.77■□□□□ 0.92
CLDN1O95832 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLDN1O95832 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.77■□□□□ 0.92
CLDN1O95832 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
CLDN1O95832 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLDN1O95832 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CLDN1O95832 AF131216.4-201ENST00000638924 1588 ntBASIC20.76■□□□□ 0.91
CLDN1O95832 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.76■□□□□ 0.91
CLDN1O95832 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN1O95832 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CLDN1O95832 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN1O95832 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CLDN1O95832 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
CLDN1O95832 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
CLDN1O95832 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN1O95832 SRD5A1P1-201ENST00000442297 786 ntBASIC20.75■□□□□ 0.91
CLDN1O95832 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CLDN1O95832 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.75■□□□□ 0.91
CLDN1O95832 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN1O95832 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.75■□□□□ 0.91
CLDN1O95832 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.75■□□□□ 0.91
CLDN1O95832 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CLDN1O95832 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN1O95832 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CLDN1O95832 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN1O95832 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
CLDN1O95832 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CLDN1O95832 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.74■□□□□ 0.91
CLDN1O95832 AP001330.3-201ENST00000520123 633 ntBASIC20.74■□□□□ 0.91
CLDN1O95832 RARRES2P11-201ENST00000635158 484 ntBASIC20.74■□□□□ 0.91
CLDN1O95832 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms