Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBL3O95164 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
UBL3O95164 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.83■□□□□ 0.93
UBL3O95164 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
UBL3O95164 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
UBL3O95164 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.83■□□□□ 0.92
UBL3O95164 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
UBL3O95164 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBL3O95164 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBL3O95164 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBL3O95164 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBL3O95164 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBL3O95164 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBL3O95164 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
UBL3O95164 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
UBL3O95164 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
UBL3O95164 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.82■□□□□ 0.92
UBL3O95164 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.81■□□□□ 0.92
UBL3O95164 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBL3O95164 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.81■□□□□ 0.92
UBL3O95164 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBL3O95164 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
UBL3O95164 AC139795.1-202ENST00000500444 432 ntBASIC20.81■□□□□ 0.92
UBL3O95164 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.81■□□□□ 0.92
UBL3O95164 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
UBL3O95164 AC087393.1-201ENST00000582896 145 ntBASIC20.81■□□□□ 0.92
UBL3O95164 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.81■□□□□ 0.92
UBL3O95164 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
UBL3O95164 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBL3O95164 LINC01124-201ENST00000409786 2117 ntBASIC20.8■□□□□ 0.92
UBL3O95164 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
UBL3O95164 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.8■□□□□ 0.92
UBL3O95164 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
UBL3O95164 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
UBL3O95164 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.79■□□□□ 0.92
UBL3O95164 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
UBL3O95164 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
UBL3O95164 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
UBL3O95164 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
UBL3O95164 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBL3O95164 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
UBL3O95164 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
UBL3O95164 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.78■□□□□ 0.92
UBL3O95164 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.78■□□□□ 0.92
UBL3O95164 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBL3O95164 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBL3O95164 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBL3O95164 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.78■□□□□ 0.92
UBL3O95164 AL033527.3-201ENST00000566366 1196 ntBASIC20.78■□□□□ 0.92
UBL3O95164 BHLHE23-202ENST00000612929 1109 ntBASIC20.78■□□□□ 0.92
UBL3O95164 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBL3O95164 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBL3O95164 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.78■□□□□ 0.92
UBL3O95164 LINC00543-201ENST00000567234 1845 ntBASIC20.78■□□□□ 0.92
UBL3O95164 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
UBL3O95164 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBL3O95164 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBL3O95164 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.77■□□□□ 0.92
UBL3O95164 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.77■□□□□ 0.92
UBL3O95164 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.77■□□□□ 0.92
UBL3O95164 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.77■□□□□ 0.92
UBL3O95164 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC20.77■□□□□ 0.92
UBL3O95164 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
UBL3O95164 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.77■□□□□ 0.91
UBL3O95164 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
UBL3O95164 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
UBL3O95164 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
UBL3O95164 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBL3O95164 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBL3O95164 AC079834.2-201ENST00000609776 1949 ntBASIC20.76■□□□□ 0.91
UBL3O95164 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
UBL3O95164 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.76■□□□□ 0.91
UBL3O95164 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBL3O95164 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.76■□□□□ 0.91
UBL3O95164 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBL3O95164 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBL3O95164 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.76■□□□□ 0.91
UBL3O95164 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.76■□□□□ 0.91
UBL3O95164 AC074183.2-201ENST00000623112 922 ntBASIC20.76■□□□□ 0.91
UBL3O95164 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
UBL3O95164 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBL3O95164 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
UBL3O95164 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
UBL3O95164 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.75■□□□□ 0.91
UBL3O95164 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.75■□□□□ 0.91
UBL3O95164 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.75■□□□□ 0.91
UBL3O95164 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
UBL3O95164 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
UBL3O95164 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBL3O95164 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBL3O95164 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBL3O95164 AP003733.4-201ENST00000623785 1697 ntBASIC20.74■□□□□ 0.91
UBL3O95164 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBL3O95164 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBL3O95164 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBL3O95164 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.74■□□□□ 0.91
UBL3O95164 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
UBL3O95164 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
UBL3O95164 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
UBL3O95164 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms