Protein–RNA interactions for Protein: O15522

NKX2-8, Homeobox protein Nkx-2.8, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-8O15522 SUDS3P1-201ENST00000505831 966 ntBASIC21.77■■□□□ 1.08
NKX2-8O15522 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.77■■□□□ 1.08
NKX2-8O15522 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.77■■□□□ 1.08
NKX2-8O15522 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.77■■□□□ 1.08
NKX2-8O15522 AC092666.2-201ENST00000613287 246 ntBASIC21.77■■□□□ 1.08
NKX2-8O15522 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
NKX2-8O15522 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
NKX2-8O15522 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
NKX2-8O15522 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.76■■□□□ 1.07
NKX2-8O15522 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
NKX2-8O15522 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NKX2-8O15522 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.76■■□□□ 1.07
NKX2-8O15522 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
NKX2-8O15522 SRD5A1P1-201ENST00000442297 786 ntBASIC21.76■■□□□ 1.07
NKX2-8O15522 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NKX2-8O15522 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NKX2-8O15522 AC135279.3-201ENST00000610945 1311 ntBASIC21.76■■□□□ 1.07
NKX2-8O15522 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NKX2-8O15522 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NKX2-8O15522 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.75■■□□□ 1.07
NKX2-8O15522 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC21.75■■□□□ 1.07
NKX2-8O15522 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
NKX2-8O15522 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NKX2-8O15522 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NKX2-8O15522 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NKX2-8O15522 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NKX2-8O15522 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.74■■□□□ 1.07
NKX2-8O15522 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NKX2-8O15522 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
NKX2-8O15522 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NKX2-8O15522 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NKX2-8O15522 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.74■■□□□ 1.07
NKX2-8O15522 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NKX2-8O15522 AC024257.2-201ENST00000549699 147 ntBASIC21.74■■□□□ 1.07
NKX2-8O15522 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
NKX2-8O15522 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NKX2-8O15522 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.74■■□□□ 1.07
NKX2-8O15522 SHF-206ENST00000560471 2499 ntTSL 5 BASIC21.74■■□□□ 1.07
NKX2-8O15522 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
NKX2-8O15522 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.73■■□□□ 1.07
NKX2-8O15522 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC21.73■■□□□ 1.07
NKX2-8O15522 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NKX2-8O15522 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
NKX2-8O15522 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NKX2-8O15522 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.73■■□□□ 1.07
NKX2-8O15522 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NKX2-8O15522 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC21.73■■□□□ 1.07
NKX2-8O15522 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.73■■□□□ 1.07
NKX2-8O15522 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.73■■□□□ 1.07
NKX2-8O15522 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NKX2-8O15522 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NKX2-8O15522 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NKX2-8O15522 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NKX2-8O15522 AC026271.2-201ENST00000428091 497 ntBASIC21.72■■□□□ 1.07
NKX2-8O15522 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.72■■□□□ 1.07
NKX2-8O15522 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
NKX2-8O15522 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
NKX2-8O15522 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NKX2-8O15522 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.71■■□□□ 1.07
NKX2-8O15522 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.71■■□□□ 1.07
NKX2-8O15522 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
NKX2-8O15522 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NKX2-8O15522 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NKX2-8O15522 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NKX2-8O15522 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.71■■□□□ 1.07
NKX2-8O15522 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.71■■□□□ 1.07
NKX2-8O15522 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
NKX2-8O15522 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NKX2-8O15522 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.71■■□□□ 1.07
NKX2-8O15522 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
NKX2-8O15522 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
NKX2-8O15522 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NKX2-8O15522 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NKX2-8O15522 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NKX2-8O15522 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NKX2-8O15522 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
NKX2-8O15522 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NKX2-8O15522 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.7■■□□□ 1.06
NKX2-8O15522 AL355001.2-201ENST00000620617 1191 ntBASIC21.7■■□□□ 1.06
NKX2-8O15522 AC097639.1-201ENST00000565519 1891 ntBASIC21.7■■□□□ 1.06
NKX2-8O15522 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.7■■□□□ 1.06
NKX2-8O15522 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NKX2-8O15522 ERN1-208ENST00000606895 2068 ntBASIC21.7■■□□□ 1.06
NKX2-8O15522 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NKX2-8O15522 AC096887.2-201ENST00000623443 1957 ntBASIC21.69■■□□□ 1.06
NKX2-8O15522 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NKX2-8O15522 EDA-201ENST00000338901 1233 ntBASIC21.69■■□□□ 1.06
NKX2-8O15522 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NKX2-8O15522 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC21.69■■□□□ 1.06
NKX2-8O15522 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.69■■□□□ 1.06
NKX2-8O15522 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NKX2-8O15522 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
NKX2-8O15522 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NKX2-8O15522 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.68■■□□□ 1.06
NKX2-8O15522 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
NKX2-8O15522 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.67■■□□□ 1.06
NKX2-8O15522 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
NKX2-8O15522 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
NKX2-8O15522 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.67■■□□□ 1.06
NKX2-8O15522 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms