Protein–RNA interactions for Protein: E7EW58

LRRN3, Leucine-rich repeat neuronal protein 3 (Fragment), humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRN3E7EW58 MIR6089-201ENST00000616698 64 ntBASIC21.21■□□□□ 0.99
LRRN3E7EW58 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRN3E7EW58 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LRRN3E7EW58 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.21■□□□□ 0.99
LRRN3E7EW58 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
LRRN3E7EW58 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.2■□□□□ 0.98
LRRN3E7EW58 KRT18P60-201ENST00000312876 1297 ntBASIC21.2■□□□□ 0.98
LRRN3E7EW58 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.2■□□□□ 0.98
LRRN3E7EW58 AC129492.7-201ENST00000622992 756 ntBASIC21.2■□□□□ 0.98
LRRN3E7EW58 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LRRN3E7EW58 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LRRN3E7EW58 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRRN3E7EW58 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRN3E7EW58 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRRN3E7EW58 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.19■□□□□ 0.98
LRRN3E7EW58 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
LRRN3E7EW58 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.19■□□□□ 0.98
LRRN3E7EW58 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRRN3E7EW58 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRN3E7EW58 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
LRRN3E7EW58 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LRRN3E7EW58 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.18■□□□□ 0.98
LRRN3E7EW58 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.18■□□□□ 0.98
LRRN3E7EW58 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.18■□□□□ 0.98
LRRN3E7EW58 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRN3E7EW58 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
LRRN3E7EW58 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRN3E7EW58 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
LRRN3E7EW58 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
LRRN3E7EW58 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.18■□□□□ 0.98
LRRN3E7EW58 MIR6765-201ENST00000614092 87 ntBASIC21.18■□□□□ 0.98
LRRN3E7EW58 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRN3E7EW58 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
LRRN3E7EW58 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRRN3E7EW58 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRN3E7EW58 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRRN3E7EW58 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRRN3E7EW58 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.17■□□□□ 0.98
LRRN3E7EW58 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.17■□□□□ 0.98
LRRN3E7EW58 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRN3E7EW58 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRN3E7EW58 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
LRRN3E7EW58 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRRN3E7EW58 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRRN3E7EW58 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRN3E7EW58 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRN3E7EW58 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRN3E7EW58 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRRN3E7EW58 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.17■□□□□ 0.98
LRRN3E7EW58 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRRN3E7EW58 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRN3E7EW58 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
LRRN3E7EW58 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRRN3E7EW58 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.16■□□□□ 0.98
LRRN3E7EW58 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRN3E7EW58 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRN3E7EW58 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRN3E7EW58 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRN3E7EW58 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
LRRN3E7EW58 ABHD17AP5-201ENST00000580133 923 ntBASIC21.16■□□□□ 0.98
LRRN3E7EW58 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRRN3E7EW58 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRRN3E7EW58 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRRN3E7EW58 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRN3E7EW58 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRN3E7EW58 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.15■□□□□ 0.98
LRRN3E7EW58 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRN3E7EW58 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.15■□□□□ 0.98
LRRN3E7EW58 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.15■□□□□ 0.98
LRRN3E7EW58 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRRN3E7EW58 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRRN3E7EW58 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LRRN3E7EW58 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
LRRN3E7EW58 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.14■□□□□ 0.97
LRRN3E7EW58 LINC00543-201ENST00000567234 1845 ntBASIC21.14■□□□□ 0.97
LRRN3E7EW58 AC087393.1-201ENST00000582896 145 ntBASIC21.14■□□□□ 0.97
LRRN3E7EW58 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRN3E7EW58 HLA-L-211ENST00000482052 1765 ntBASIC21.14■□□□□ 0.97
LRRN3E7EW58 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRN3E7EW58 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRN3E7EW58 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRN3E7EW58 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRRN3E7EW58 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LRRN3E7EW58 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRN3E7EW58 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRN3E7EW58 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRN3E7EW58 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRN3E7EW58 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRN3E7EW58 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.13■□□□□ 0.97
LRRN3E7EW58 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.13■□□□□ 0.97
LRRN3E7EW58 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRN3E7EW58 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRN3E7EW58 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRN3E7EW58 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRRN3E7EW58 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.13■□□□□ 0.97
LRRN3E7EW58 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRRN3E7EW58 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LRRN3E7EW58 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LRRN3E7EW58 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LRRN3E7EW58 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms