Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
RNF103-CHMP3A0A140T963 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
RNF103-CHMP3A0A140T963 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.32■■□□□ 1.16
RNF103-CHMP3A0A140T963 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC22.32■■□□□ 1.16
RNF103-CHMP3A0A140T963 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.32■■□□□ 1.16
RNF103-CHMP3A0A140T963 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF103-CHMP3A0A140T963 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF103-CHMP3A0A140T963 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF103-CHMP3A0A140T963 GPX1-201ENST00000419349 1106 ntBASIC22.32■■□□□ 1.16
RNF103-CHMP3A0A140T963 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
RNF103-CHMP3A0A140T963 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.32■■□□□ 1.16
RNF103-CHMP3A0A140T963 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC22.32■■□□□ 1.16
RNF103-CHMP3A0A140T963 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC22.32■■□□□ 1.16
RNF103-CHMP3A0A140T963 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RNF103-CHMP3A0A140T963 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF103-CHMP3A0A140T963 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
RNF103-CHMP3A0A140T963 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
RNF103-CHMP3A0A140T963 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
RNF103-CHMP3A0A140T963 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF103-CHMP3A0A140T963 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RNF103-CHMP3A0A140T963 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC22.31■■□□□ 1.16
RNF103-CHMP3A0A140T963 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.31■■□□□ 1.16
RNF103-CHMP3A0A140T963 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RNF103-CHMP3A0A140T963 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RNF103-CHMP3A0A140T963 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
RNF103-CHMP3A0A140T963 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
RNF103-CHMP3A0A140T963 AC079834.2-201ENST00000609776 1949 ntBASIC22.3■■□□□ 1.16
RNF103-CHMP3A0A140T963 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF103-CHMP3A0A140T963 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.3■■□□□ 1.16
RNF103-CHMP3A0A140T963 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RNF103-CHMP3A0A140T963 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
RNF103-CHMP3A0A140T963 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RNF103-CHMP3A0A140T963 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF103-CHMP3A0A140T963 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF103-CHMP3A0A140T963 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
RNF103-CHMP3A0A140T963 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.29■■□□□ 1.16
RNF103-CHMP3A0A140T963 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
RNF103-CHMP3A0A140T963 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF103-CHMP3A0A140T963 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RNF103-CHMP3A0A140T963 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
RNF103-CHMP3A0A140T963 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.28■■□□□ 1.16
RNF103-CHMP3A0A140T963 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
RNF103-CHMP3A0A140T963 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.28■■□□□ 1.16
RNF103-CHMP3A0A140T963 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
RNF103-CHMP3A0A140T963 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RNF103-CHMP3A0A140T963 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.27■■□□□ 1.16
RNF103-CHMP3A0A140T963 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RNF103-CHMP3A0A140T963 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RNF103-CHMP3A0A140T963 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC22.27■■□□□ 1.16
RNF103-CHMP3A0A140T963 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
RNF103-CHMP3A0A140T963 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RNF103-CHMP3A0A140T963 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.26■■□□□ 1.15
RNF103-CHMP3A0A140T963 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RNF103-CHMP3A0A140T963 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RNF103-CHMP3A0A140T963 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC22.26■■□□□ 1.15
RNF103-CHMP3A0A140T963 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RNF103-CHMP3A0A140T963 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.26■■□□□ 1.15
RNF103-CHMP3A0A140T963 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC22.25■■□□□ 1.15
RNF103-CHMP3A0A140T963 LINC00543-201ENST00000567234 1845 ntBASIC22.25■■□□□ 1.15
RNF103-CHMP3A0A140T963 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.25■■□□□ 1.15
RNF103-CHMP3A0A140T963 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF103-CHMP3A0A140T963 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF103-CHMP3A0A140T963 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
RNF103-CHMP3A0A140T963 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
RNF103-CHMP3A0A140T963 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RNF103-CHMP3A0A140T963 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF103-CHMP3A0A140T963 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
RNF103-CHMP3A0A140T963 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF103-CHMP3A0A140T963 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF103-CHMP3A0A140T963 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF103-CHMP3A0A140T963 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.24■■□□□ 1.15
RNF103-CHMP3A0A140T963 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.24■■□□□ 1.15
RNF103-CHMP3A0A140T963 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF103-CHMP3A0A140T963 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.24■■□□□ 1.15
RNF103-CHMP3A0A140T963 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF103-CHMP3A0A140T963 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF103-CHMP3A0A140T963 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RNF103-CHMP3A0A140T963 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
RNF103-CHMP3A0A140T963 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC22.23■■□□□ 1.15
RNF103-CHMP3A0A140T963 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RNF103-CHMP3A0A140T963 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF103-CHMP3A0A140T963 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
RNF103-CHMP3A0A140T963 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RNF103-CHMP3A0A140T963 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF103-CHMP3A0A140T963 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF103-CHMP3A0A140T963 RAP2CP1-202ENST00000605179 643 ntBASIC22.23■■□□□ 1.15
RNF103-CHMP3A0A140T963 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RNF103-CHMP3A0A140T963 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
RNF103-CHMP3A0A140T963 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
RNF103-CHMP3A0A140T963 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RNF103-CHMP3A0A140T963 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
RNF103-CHMP3A0A140T963 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
RNF103-CHMP3A0A140T963 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RNF103-CHMP3A0A140T963 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
RNF103-CHMP3A0A140T963 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF103-CHMP3A0A140T963 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RNF103-CHMP3A0A140T963 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
RNF103-CHMP3A0A140T963 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.21■■□□□ 1.15
RNF103-CHMP3A0A140T963 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RNF103-CHMP3A0A140T963 AC026202.3-201ENST00000600805 1127 ntBASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 317.3 ms