Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV27A0A087WT01 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.12■□□□□ 0.97
TRAV27A0A087WT01 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV27A0A087WT01 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV27A0A087WT01 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV27A0A087WT01 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV27A0A087WT01 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRAV27A0A087WT01 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TRAV27A0A087WT01 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.11■□□□□ 0.97
TRAV27A0A087WT01 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAV27A0A087WT01 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
TRAV27A0A087WT01 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRAV27A0A087WT01 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.11■□□□□ 0.97
TRAV27A0A087WT01 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TRAV27A0A087WT01 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRAV27A0A087WT01 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAV27A0A087WT01 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
TRAV27A0A087WT01 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
TRAV27A0A087WT01 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAV27A0A087WT01 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAV27A0A087WT01 ABCB10P4-201ENST00000566803 2184 ntBASIC21.1■□□□□ 0.97
TRAV27A0A087WT01 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRAV27A0A087WT01 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.09■□□□□ 0.97
TRAV27A0A087WT01 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TRAV27A0A087WT01 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAV27A0A087WT01 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAV27A0A087WT01 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.09■□□□□ 0.97
TRAV27A0A087WT01 AL592293.1-201ENST00000502889 1188 ntBASIC21.09■□□□□ 0.97
TRAV27A0A087WT01 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAV27A0A087WT01 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
TRAV27A0A087WT01 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.09■□□□□ 0.97
TRAV27A0A087WT01 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAV27A0A087WT01 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
TRAV27A0A087WT01 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.09■□□□□ 0.97
TRAV27A0A087WT01 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRAV27A0A087WT01 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRAV27A0A087WT01 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.08■□□□□ 0.97
TRAV27A0A087WT01 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRAV27A0A087WT01 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRAV27A0A087WT01 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRAV27A0A087WT01 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRAV27A0A087WT01 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TRAV27A0A087WT01 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TRAV27A0A087WT01 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRAV27A0A087WT01 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRAV27A0A087WT01 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
TRAV27A0A087WT01 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV27A0A087WT01 SPCS2P3-201ENST00000500401 656 ntBASIC21.07■□□□□ 0.96
TRAV27A0A087WT01 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.07■□□□□ 0.96
TRAV27A0A087WT01 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV27A0A087WT01 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV27A0A087WT01 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRAV27A0A087WT01 HYI-213ENST00000583037 1322 ntTSL 5 BASIC21.06■□□□□ 0.96
TRAV27A0A087WT01 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.06■□□□□ 0.96
TRAV27A0A087WT01 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
TRAV27A0A087WT01 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.06■□□□□ 0.96
TRAV27A0A087WT01 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRAV27A0A087WT01 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV27A0A087WT01 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.05■□□□□ 0.96
TRAV27A0A087WT01 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV27A0A087WT01 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV27A0A087WT01 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
TRAV27A0A087WT01 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.05■□□□□ 0.96
TRAV27A0A087WT01 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV27A0A087WT01 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV27A0A087WT01 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
TRAV27A0A087WT01 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV27A0A087WT01 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.04■□□□□ 0.96
TRAV27A0A087WT01 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.04■□□□□ 0.96
TRAV27A0A087WT01 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV27A0A087WT01 RPS2P7-201ENST00000447334 885 ntBASIC21.04■□□□□ 0.96
TRAV27A0A087WT01 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV27A0A087WT01 AC018755.3-202ENST00000596210 929 ntBASIC21.04■□□□□ 0.96
TRAV27A0A087WT01 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV27A0A087WT01 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV27A0A087WT01 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV27A0A087WT01 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TRAV27A0A087WT01 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
TRAV27A0A087WT01 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV27A0A087WT01 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.04■□□□□ 0.96
TRAV27A0A087WT01 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRAV27A0A087WT01 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
TRAV27A0A087WT01 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAV27A0A087WT01 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRAV27A0A087WT01 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
TRAV27A0A087WT01 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
TRAV27A0A087WT01 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
TRAV27A0A087WT01 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRAV27A0A087WT01 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TRAV27A0A087WT01 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.02■□□□□ 0.96
TRAV27A0A087WT01 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.02■□□□□ 0.96
TRAV27A0A087WT01 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
TRAV27A0A087WT01 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.02■□□□□ 0.96
TRAV27A0A087WT01 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TRAV27A0A087WT01 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.01■□□□□ 0.95
TRAV27A0A087WT01 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV27A0A087WT01 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.01■□□□□ 0.95
TRAV27A0A087WT01 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TRAV27A0A087WT01 RARRES2P2-201ENST00000394842 485 ntBASIC21.01■□□□□ 0.95
TRAV27A0A087WT01 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms