Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGC3Q9UN70 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
PCDHGC3Q9UN70 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGC3Q9UN70 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.58■□□□□ 0.25
PCDHGC3Q9UN70 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGC3Q9UN70 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.58■□□□□ 0.25
PCDHGC3Q9UN70 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
PCDHGC3Q9UN70 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 KRT18P43-201ENST00000469825 1281 ntBASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 AC093214.1-201ENST00000511688 1107 ntBASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 AL121723.1-201ENST00000445194 1519 ntBASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 AC138035.3-201ENST00000622706 2791 ntBASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
PCDHGC3Q9UN70 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 AL512638.1-201ENST00000457493 794 ntBASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 AC135586.1-201ENST00000539323 574 ntBASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 TIMM17BP1-201ENST00000545713 516 ntBASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 SRD5A3P1-201ENST00000603021 949 ntBASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 AC000095.1-201ENST00000603208 874 ntBASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 AL391069.4-201ENST00000609583 481 ntBASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 AC023157.3-201ENST00000619086 2088 ntBASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGC3Q9UN70 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms