Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
FNDC9Q8TBE3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
FNDC9Q8TBE3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.25□□□□□ -0.13
FNDC9Q8TBE3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.25□□□□□ -0.13
FNDC9Q8TBE3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
FNDC9Q8TBE3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.25□□□□□ -0.13
FNDC9Q8TBE3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.25□□□□□ -0.13
FNDC9Q8TBE3 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
FNDC9Q8TBE3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.25□□□□□ -0.13
FNDC9Q8TBE3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 COX20P2-201ENST00000452636 358 ntBASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 AC004461.2-201ENST00000629517 803 ntBASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
FNDC9Q8TBE3 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 PIN1P1-201ENST00000412108 996 ntBASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 GNAQP1-201ENST00000444815 1067 ntBASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 DOC2GP-202ENST00000514950 1163 ntBASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 AC190387.1-201ENST00000551683 408 ntBASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 AC074044.1-201ENST00000609673 707 ntBASIC14.23□□□□□ -0.13
FNDC9Q8TBE3 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms