Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 AC093827.2-201ENST00000512654 315 ntBASIC13.18□□□□□ -0.3
ZNF546Q86UE3 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ZNF546Q86UE3 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 AL359881.3-201ENST00000602640 1721 ntBASIC13.17□□□□□ -0.3
ZNF546Q86UE3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 SPDYE21P-201ENST00000413323 827 ntBASIC13.17□□□□□ -0.3
ZNF546Q86UE3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 AC022616.7-201ENST00000525383 220 ntBASIC13.17□□□□□ -0.3
ZNF546Q86UE3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.17□□□□□ -0.3
ZNF546Q86UE3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ZNF546Q86UE3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ZNF546Q86UE3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms