Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC10.55□□□□□ -0.72
SCXQ7RTU7 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC10.54□□□□□ -0.72
SCXQ7RTU7 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC10.54□□□□□ -0.72
SCXQ7RTU7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC10.54□□□□□ -0.72
SCXQ7RTU7 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC10.54□□□□□ -0.72
SCXQ7RTU7 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC10.54□□□□□ -0.72
SCXQ7RTU7 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC10.54□□□□□ -0.72
SCXQ7RTU7 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC10.54□□□□□ -0.72
SCXQ7RTU7 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC10.54□□□□□ -0.72
SCXQ7RTU7 AC138761.1-201ENST00000584393 385 ntBASIC10.54□□□□□ -0.72
SCXQ7RTU7 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
SCXQ7RTU7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC10.54□□□□□ -0.72
SCXQ7RTU7 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC10.54□□□□□ -0.72
SCXQ7RTU7 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC10.54□□□□□ -0.72
SCXQ7RTU7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC10.54□□□□□ -0.72
SCXQ7RTU7 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
SCXQ7RTU7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC10.54□□□□□ -0.72
SCXQ7RTU7 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC10.54□□□□□ -0.72
SCXQ7RTU7 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
SCXQ7RTU7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
SCXQ7RTU7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC10.53□□□□□ -0.72
SCXQ7RTU7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC10.53□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms