Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CDKN1AP38936 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDKN1AP38936 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.49□□□□□ -0.25
CDKN1AP38936 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
CDKN1AP38936 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDKN1AP38936 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDKN1AP38936 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDKN1AP38936 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDKN1AP38936 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDKN1AP38936 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDKN1AP38936 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDKN1AP38936 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDKN1AP38936 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDKN1AP38936 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDKN1AP38936 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDKN1AP38936 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CDKN1AP38936 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDKN1AP38936 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.49□□□□□ -0.25
CDKN1AP38936 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.49□□□□□ -0.25
CDKN1AP38936 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDKN1AP38936 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC13.49□□□□□ -0.25
CDKN1AP38936 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CDKN1AP38936 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC13.49□□□□□ -0.25
CDKN1AP38936 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDKN1AP38936 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CDKN1AP38936 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDKN1AP38936 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDKN1AP38936 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDKN1AP38936 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDKN1AP38936 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDKN1AP38936 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDKN1AP38936 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CDKN1AP38936 LINC02228-204ENST00000642115 2962 ntBASIC13.48□□□□□ -0.25
CDKN1AP38936 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDKN1AP38936 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDKN1AP38936 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.48□□□□□ -0.25
CDKN1AP38936 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
CDKN1AP38936 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
CDKN1AP38936 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDKN1AP38936 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDKN1AP38936 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.48□□□□□ -0.25
CDKN1AP38936 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDKN1AP38936 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDKN1AP38936 AC026691.1-201ENST00000602502 2017 ntBASIC13.48□□□□□ -0.25
CDKN1AP38936 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.48□□□□□ -0.25
CDKN1AP38936 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDKN1AP38936 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CDKN1AP38936 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.48□□□□□ -0.25
CDKN1AP38936 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CDKN1AP38936 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDKN1AP38936 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDKN1AP38936 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDKN1AP38936 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDKN1AP38936 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.48□□□□□ -0.25
CDKN1AP38936 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.48□□□□□ -0.25
CDKN1AP38936 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.48□□□□□ -0.25
CDKN1AP38936 TARDBPP1-201ENST00000442013 1203 ntBASIC13.48□□□□□ -0.25
CDKN1AP38936 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.48□□□□□ -0.25
CDKN1AP38936 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.48□□□□□ -0.25
CDKN1AP38936 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CDKN1AP38936 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.48□□□□□ -0.25
CDKN1AP38936 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.48□□□□□ -0.25
CDKN1AP38936 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC13.48□□□□□ -0.25
CDKN1AP38936 AC133539.2-201ENST00000604757 467 ntBASIC13.48□□□□□ -0.25
CDKN1AP38936 CU634019.7-201ENST00000624153 1185 ntBASIC13.48□□□□□ -0.25
CDKN1AP38936 FP236241.2-201ENST00000624906 1185 ntBASIC13.48□□□□□ -0.25
CDKN1AP38936 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.48□□□□□ -0.25
CDKN1AP38936 COX11-210ENST00000639671 696 ntBASIC13.48□□□□□ -0.25
CDKN1AP38936 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDKN1AP38936 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.48□□□□□ -0.25
CDKN1AP38936 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDKN1AP38936 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
CDKN1AP38936 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CDKN1AP38936 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDKN1AP38936 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDKN1AP38936 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.48□□□□□ -0.25
CDKN1AP38936 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CDKN1AP38936 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
CDKN1AP38936 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.48□□□□□ -0.25
CDKN1AP38936 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDKN1AP38936 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDKN1AP38936 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CDKN1AP38936 KRT8P22-201ENST00000562317 1415 ntBASIC13.47□□□□□ -0.25
CDKN1AP38936 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDKN1AP38936 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
CDKN1AP38936 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDKN1AP38936 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.47□□□□□ -0.25
CDKN1AP38936 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.47□□□□□ -0.25
CDKN1AP38936 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDKN1AP38936 AC018665.1-201ENST00000622927 1362 ntBASIC13.47□□□□□ -0.25
CDKN1AP38936 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CDKN1AP38936 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDKN1AP38936 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
CDKN1AP38936 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CDKN1AP38936 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CDKN1AP38936 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CDKN1AP38936 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.47□□□□□ -0.25
CDKN1AP38936 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.47□□□□□ -0.25
CDKN1AP38936 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.47□□□□□ -0.25
CDKN1AP38936 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms