Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.16■□□□□ 0.02
PTX3P26022 AL136317.3-201ENST00000618497 906 ntBASIC15.16■□□□□ 0.02
PTX3P26022 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.16■□□□□ 0.02
PTX3P26022 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.16■□□□□ 0.02
PTX3P26022 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PTX3P26022 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTX3P26022 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTX3P26022 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
PTX3P26022 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.16■□□□□ 0.02
PTX3P26022 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTX3P26022 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTX3P26022 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PTX3P26022 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.16■□□□□ 0.02
PTX3P26022 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTX3P26022 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTX3P26022 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PTX3P26022 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.16■□□□□ 0.02
PTX3P26022 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PTX3P26022 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.16■□□□□ 0.02
PTX3P26022 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTX3P26022 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTX3P26022 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PTX3P26022 AC013268.4-201ENST00000637413 2228 ntBASIC15.15■□□□□ 0.02
PTX3P26022 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTX3P26022 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTX3P26022 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTX3P26022 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTX3P26022 AL139400.1-201ENST00000366220 510 ntBASIC15.15■□□□□ 0.02
PTX3P26022 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTX3P26022 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
PTX3P26022 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PTX3P26022 HIST3H2BA-201ENST00000436555 524 ntBASIC15.15■□□□□ 0.02
PTX3P26022 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTX3P26022 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.15■□□□□ 0.02
PTX3P26022 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTX3P26022 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.15■□□□□ 0.02
PTX3P26022 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.15■□□□□ 0.02
PTX3P26022 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.15■□□□□ 0.02
PTX3P26022 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.15■□□□□ 0.02
PTX3P26022 AP001160.2-201ENST00000596071 487 ntBASIC15.15■□□□□ 0.02
PTX3P26022 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.15■□□□□ 0.02
PTX3P26022 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PTX3P26022 MIR6069-201ENST00000620069 79 ntBASIC15.15■□□□□ 0.02
PTX3P26022 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.15■□□□□ 0.02
PTX3P26022 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTX3P26022 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTX3P26022 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.15■□□□□ 0.02
PTX3P26022 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTX3P26022 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTX3P26022 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PTX3P26022 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PTX3P26022 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTX3P26022 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.15■□□□□ 0.02
PTX3P26022 AC090616.6-203ENST00000579186 1945 ntBASIC15.15■□□□□ 0.02
PTX3P26022 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTX3P26022 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTX3P26022 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.15■□□□□ 0.02
PTX3P26022 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTX3P26022 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTX3P26022 TUBB3P1-201ENST00000405796 1332 ntBASIC15.15■□□□□ 0.02
PTX3P26022 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTX3P26022 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PTX3P26022 AC023824.1-201ENST00000562945 2975 ntBASIC15.15■□□□□ 0.02
PTX3P26022 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.15■□□□□ 0.02
PTX3P26022 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PTX3P26022 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.15■□□□□ 0.02
PTX3P26022 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.15■□□□□ 0.02
PTX3P26022 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PTX3P26022 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTX3P26022 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.14■□□□□ 0.01
PTX3P26022 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.14■□□□□ 0.01
PTX3P26022 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTX3P26022 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTX3P26022 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTX3P26022 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTX3P26022 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTX3P26022 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTX3P26022 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTX3P26022 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.14■□□□□ 0.01
PTX3P26022 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTX3P26022 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTX3P26022 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
PTX3P26022 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTX3P26022 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTX3P26022 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTX3P26022 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
PTX3P26022 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.14■□□□□ 0.01
PTX3P26022 SERBP1P3-201ENST00000459980 809 ntBASIC15.14■□□□□ 0.01
PTX3P26022 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.14■□□□□ 0.01
PTX3P26022 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.14■□□□□ 0.01
PTX3P26022 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC15.14■□□□□ 0.01
PTX3P26022 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC15.14■□□□□ 0.01
PTX3P26022 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTX3P26022 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PTX3P26022 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.14■□□□□ 0.01
PTX3P26022 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.14■□□□□ 0.01
PTX3P26022 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.14■□□□□ 0.01
PTX3P26022 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PTX3P26022 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PTX3P26022 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms