Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.41□□□□□ -0.1
CD53P19397 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
CD53P19397 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.41□□□□□ -0.1
CD53P19397 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.41□□□□□ -0.1
CD53P19397 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD53P19397 AL009183.1-201ENST00000603760 355 ntBASIC14.41□□□□□ -0.1
CD53P19397 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.41□□□□□ -0.1
CD53P19397 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.41□□□□□ -0.1
CD53P19397 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CD53P19397 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD53P19397 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CD53P19397 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD53P19397 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD53P19397 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD53P19397 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD53P19397 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD53P19397 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD53P19397 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.41□□□□□ -0.1
CD53P19397 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD53P19397 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD53P19397 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD53P19397 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD53P19397 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD53P19397 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD53P19397 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD53P19397 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CD53P19397 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD53P19397 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.41□□□□□ -0.1
CD53P19397 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.41□□□□□ -0.1
CD53P19397 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CD53P19397 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
CD53P19397 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CD53P19397 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.41□□□□□ -0.1
CD53P19397 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
CD53P19397 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.4□□□□□ -0.1
CD53P19397 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD53P19397 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD53P19397 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD53P19397 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD53P19397 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD53P19397 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD53P19397 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CD53P19397 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CD53P19397 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD53P19397 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD53P19397 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD53P19397 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD53P19397 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD53P19397 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD53P19397 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD53P19397 AC069120.2-201ENST00000524091 540 ntBASIC14.4□□□□□ -0.1
CD53P19397 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.4□□□□□ -0.1
CD53P19397 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.4□□□□□ -0.1
CD53P19397 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.4□□□□□ -0.1
CD53P19397 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD53P19397 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CD53P19397 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
CD53P19397 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD53P19397 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD53P19397 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD53P19397 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD53P19397 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
CD53P19397 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD53P19397 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD53P19397 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CD53P19397 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.4□□□□□ -0.1
CD53P19397 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.4□□□□□ -0.1
CD53P19397 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD53P19397 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.39□□□□□ -0.11
CD53P19397 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.39□□□□□ -0.11
CD53P19397 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD53P19397 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD53P19397 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CD53P19397 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD53P19397 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.39□□□□□ -0.11
CD53P19397 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD53P19397 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD53P19397 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CD53P19397 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD53P19397 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD53P19397 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.39□□□□□ -0.11
CD53P19397 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.39□□□□□ -0.11
CD53P19397 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD53P19397 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD53P19397 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD53P19397 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD53P19397 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD53P19397 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CD53P19397 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC14.39□□□□□ -0.11
CD53P19397 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.39□□□□□ -0.11
CD53P19397 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD53P19397 HAUS4P1-201ENST00000406739 1145 ntBASIC14.39□□□□□ -0.11
CD53P19397 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.39□□□□□ -0.11
CD53P19397 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD53P19397 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.39□□□□□ -0.11
CD53P19397 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.39□□□□□ -0.11
CD53P19397 AC097493.3-201ENST00000509725 367 ntBASIC14.39□□□□□ -0.11
CD53P19397 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.39□□□□□ -0.11
CD53P19397 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.39□□□□□ -0.11
CD53P19397 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms