Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
GSC2O15499 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
GSC2O15499 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC15.22■□□□□ 0.03
GSC2O15499 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.22■□□□□ 0.03
GSC2O15499 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
GSC2O15499 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GSC2O15499 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GSC2O15499 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
GSC2O15499 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.21■□□□□ 0.03
GSC2O15499 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GSC2O15499 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GSC2O15499 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GSC2O15499 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GSC2O15499 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
GSC2O15499 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GSC2O15499 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.21■□□□□ 0.03
GSC2O15499 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
GSC2O15499 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GSC2O15499 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GSC2O15499 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
GSC2O15499 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.21■□□□□ 0.03
GSC2O15499 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
GSC2O15499 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.21■□□□□ 0.03
GSC2O15499 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.21■□□□□ 0.03
GSC2O15499 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.21■□□□□ 0.03
GSC2O15499 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GSC2O15499 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
GSC2O15499 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.21■□□□□ 0.03
GSC2O15499 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GSC2O15499 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.21■□□□□ 0.03
GSC2O15499 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GSC2O15499 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
GSC2O15499 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
GSC2O15499 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.21■□□□□ 0.03
GSC2O15499 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.21■□□□□ 0.03
GSC2O15499 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GSC2O15499 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.21■□□□□ 0.03
GSC2O15499 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.21■□□□□ 0.02
GSC2O15499 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
GSC2O15499 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
GSC2O15499 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
GSC2O15499 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
GSC2O15499 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
GSC2O15499 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.21■□□□□ 0.02
GSC2O15499 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
GSC2O15499 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GSC2O15499 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
GSC2O15499 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.2■□□□□ 0.02
GSC2O15499 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GSC2O15499 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GSC2O15499 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC15.2■□□□□ 0.02
GSC2O15499 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
GSC2O15499 AC006504.4-201ENST00000592118 1568 ntBASIC15.2■□□□□ 0.02
GSC2O15499 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.2■□□□□ 0.02
GSC2O15499 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
GSC2O15499 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GSC2O15499 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GSC2O15499 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.2■□□□□ 0.02
GSC2O15499 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
GSC2O15499 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GSC2O15499 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GSC2O15499 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GSC2O15499 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GSC2O15499 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
GSC2O15499 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GSC2O15499 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.2■□□□□ 0.02
GSC2O15499 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.2■□□□□ 0.02
GSC2O15499 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.2■□□□□ 0.02
GSC2O15499 AC074051.2-201ENST00000565115 352 ntBASIC15.2■□□□□ 0.02
GSC2O15499 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.2■□□□□ 0.02
GSC2O15499 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GSC2O15499 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.2■□□□□ 0.02
GSC2O15499 AC092329.2-201ENST00000598402 547 ntBASIC15.2■□□□□ 0.02
GSC2O15499 AL139288.1-201ENST00000623748 933 ntBASIC15.2■□□□□ 0.02
GSC2O15499 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.2■□□□□ 0.02
GSC2O15499 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
GSC2O15499 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GSC2O15499 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GSC2O15499 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GSC2O15499 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GSC2O15499 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GSC2O15499 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GSC2O15499 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GSC2O15499 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GSC2O15499 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC15.2■□□□□ 0.02
GSC2O15499 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.2■□□□□ 0.02
GSC2O15499 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.2■□□□□ 0.02
GSC2O15499 AL359881.3-201ENST00000602640 1721 ntBASIC15.2■□□□□ 0.02
GSC2O15499 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GSC2O15499 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GSC2O15499 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GSC2O15499 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GSC2O15499 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
GSC2O15499 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
GSC2O15499 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.2■□□□□ 0.02
GSC2O15499 AP001267.2-201ENST00000532619 2086 ntBASIC15.2■□□□□ 0.02
GSC2O15499 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
GSC2O15499 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
GSC2O15499 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms