Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 SUPT5H-208ENST00000595368 659 ntTSL 218.99■□□□□ 0.635e-6■□□□□ 8.4
XRN2Q9H0D6 IDH3B-203ENST00000462967 959 ntTSL 218.82■□□□□ 0.65e-6■□□□□ 8.4
XRN2Q9H0D6 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.71■□□□□ 0.596e-10■□□□□ 8.4
XRN2Q9H0D6 SH3YL1-224ENST00000488044 672 ntTSL 418.66■□□□□ 0.585e-6■□□□□ 8.4
XRN2Q9H0D6 NISCH-205ENST00000467594 1014 ntTSL 218.46■□□□□ 0.555e-6■□□□□ 8.4
XRN2Q9H0D6 SPON2-206ENST00000503765 597 ntTSL 318.42■□□□□ 0.545e-6■□□□□ 8.4
XRN2Q9H0D6 GGT7-204ENST00000470952 427 ntTSL 518.32■□□□□ 0.525e-6■□□□□ 8.4
XRN2Q9H0D6 UNK-202ENST00000586527 1312 ntTSL 1 (best)18.07■□□□□ 0.485e-6■□□□□ 8.4
XRN2Q9H0D6 FAT1-208ENST00000509647 1852 ntTSL 1 (best)17.91■□□□□ 0.465e-6■□□□□ 8.4
XRN2Q9H0D6 HNRNPL-213ENST00000601664 447 ntTSL 1 (best)17.83■□□□□ 0.446e-10■□□□□ 8.4
XRN2Q9H0D6 ATG4B-213ENST00000460211 871 ntTSL 217.61■□□□□ 0.415e-6■□□□□ 8.4
XRN2Q9H0D6 NISCH-213ENST00000489895 5350 ntTSL 217.47■□□□□ 0.395e-6■□□□□ 8.4
XRN2Q9H0D6 GGT7-203ENST00000469018 1064 ntTSL 517.16■□□□□ 0.345e-6■□□□□ 8.4
XRN2Q9H0D6 UBAP2L-204ENST00000368504 1120 ntTSL 517.15■□□□□ 0.345e-6■□□□□ 8.4
XRN2Q9H0D6 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC17.15■□□□□ 0.346e-10■□□□□ 8.4
XRN2Q9H0D6 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.75■□□□□ 0.275e-6■□□□□ 8.4
XRN2Q9H0D6 ARRB2-220ENST00000577054 579 ntTSL 316.74■□□□□ 0.275e-6■□□□□ 8.4
XRN2Q9H0D6 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.66■□□□□ 0.265e-6■□□□□ 8.4
XRN2Q9H0D6 PPIG-203ENST00000414307 1062 ntTSL 1 (best)16.62■□□□□ 0.255e-6■□□□□ 8.4
XRN2Q9H0D6 SUPT5H-220ENST00000601978 538 ntTSL 216.55■□□□□ 0.245e-6■□□□□ 8.4
XRN2Q9H0D6 ABCA5-212ENST00000592568 616 ntTSL 316.52■□□□□ 0.245e-6■□□□□ 8.4
XRN2Q9H0D6 WDR74-215ENST00000544831 814 ntTSL 216.32■□□□□ 0.25e-6■□□□□ 8.4
XRN2Q9H0D6 ABCA5-209ENST00000589609 631 ntTSL 316.15■□□□□ 0.185e-6■□□□□ 8.4
XRN2Q9H0D6 PPIG-205ENST00000418888 525 ntTSL 416.11■□□□□ 0.175e-6■□□□□ 8.4
XRN2Q9H0D6 ZKSCAN1-204ENST00000482979 1449 ntTSL 1 (best)15.68■□□□□ 0.15e-6■□□□□ 8.4
XRN2Q9H0D6 UNK-204ENST00000587501 984 ntTSL 1 (best)15.65■□□□□ 0.15e-6■□□□□ 8.4
XRN2Q9H0D6 BCAR1-222ENST00000569340 714 ntTSL 315.64■□□□□ 0.096e-10■□□□□ 8.4
XRN2Q9H0D6 PSMG4-210ENST00000509933 2241 ntTSL 215.63■□□□□ 0.096e-10■□□□□ 8.4
XRN2Q9H0D6 IGF2BP1-203ENST00000499130 568 ntTSL 315.23■□□□□ 0.036e-10■□□□□ 8.4
XRN2Q9H0D6 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.23■□□□□ 0.035e-6■□□□□ 8.4
XRN2Q9H0D6 SH3YL1-220ENST00000475027 599 ntTSL 514.92□□□□□ -0.025e-6■□□□□ 8.4
XRN2Q9H0D6 AC051619.6-201ENST00000558039 595 ntTSL 4 BASIC14.74□□□□□ -0.056e-10■□□□□ 8.4
XRN2Q9H0D6 AC005089.1-201ENST00000619486 2241 ntBASIC14.68□□□□□ -0.065e-22■□□□□ 8.4
XRN2Q9H0D6 PSMG4-208ENST00000454610 2323 ntTSL 214.63□□□□□ -0.076e-10■□□□□ 8.4
XRN2Q9H0D6 SH3YL1-210ENST00000454318 581 ntTSL 314.54□□□□□ -0.085e-6■□□□□ 8.4
XRN2Q9H0D6 NEDD4L-220ENST00000587881 1984 ntTSL 514.29□□□□□ -0.125e-6■□□□□ 8.4
XRN2Q9H0D6 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.125e-6■□□□□ 8.4
XRN2Q9H0D6 PPIG-208ENST00000462903 1516 ntTSL 1 (best) BASIC14.09□□□□□ -0.155e-6■□□□□ 8.4
XRN2Q9H0D6 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.165e-6■□□□□ 8.4
XRN2Q9H0D6 TNS3-203ENST00000415929 570 ntTSL 413.97□□□□□ -0.176e-10■□□□□ 8.4
XRN2Q9H0D6 TNS3-207ENST00000450444 1832 ntTSL 513.97□□□□□ -0.176e-10■□□□□ 8.4
XRN2Q9H0D6 ZKSCAN1-202ENST00000426572 2011 ntTSL 2 BASIC13.97□□□□□ -0.175e-6■□□□□ 8.4
XRN2Q9H0D6 RPLP0-215ENST00000549242 518 ntTSL 213.67□□□□□ -0.225e-6■□□□□ 8.4
XRN2Q9H0D6 INSR-205ENST00000598216 2961 ntTSL 1 (best)13.27□□□□□ -0.295e-6■□□□□ 8.4
XRN2Q9H0D6 SH3YL1-204ENST00000403658 1279 ntTSL 2 BASIC13.17□□□□□ -0.35e-6■□□□□ 8.4
XRN2Q9H0D6 LYRM1-207ENST00000567165 931 ntTSL 1 (best)13.15□□□□□ -0.35e-6■□□□□ 8.4
XRN2Q9H0D6 PPIG-211ENST00000530152 690 ntTSL 312.84□□□□□ -0.355e-6■□□□□ 8.4
XRN2Q9H0D6 ABCA5-213ENST00000593153 3017 ntTSL 212.8□□□□□ -0.365e-6■□□□□ 8.4
XRN2Q9H0D6 WDR74-214ENST00000543688 537 ntTSL 312.77□□□□□ -0.375e-6■□□□□ 8.4
XRN2Q9H0D6 IDH3B-208ENST00000479376 436 ntTSL 212.67□□□□□ -0.385e-6■□□□□ 8.4
XRN2Q9H0D6 ATG4B-210ENST00000428861 580 ntTSL 212.64□□□□□ -0.395e-6■□□□□ 8.4
XRN2Q9H0D6 RPLP0-217ENST00000550423 561 ntTSL 312.57□□□□□ -0.45e-6■□□□□ 8.4
XRN2Q9H0D6 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.45e-6■□□□□ 8.4
XRN2Q9H0D6 ATG4B-219ENST00000479941 374 ntTSL 212.49□□□□□ -0.415e-6■□□□□ 8.4
XRN2Q9H0D6 TNS3-206ENST00000442536 1166 ntTSL 1 (best) BASIC12.38□□□□□ -0.436e-10■□□□□ 8.4
XRN2Q9H0D6 SH3YL1-225ENST00000488979 541 ntTSL 512.29□□□□□ -0.445e-6■□□□□ 8.4
XRN2Q9H0D6 RPLP0-212ENST00000548551 543 ntTSL 212.2□□□□□ -0.465e-6■□□□□ 8.4
XRN2Q9H0D6 NEDD4L-208ENST00000456173 4978 ntTSL 1 (best) BASIC11.7□□□□□ -0.545e-6■□□□□ 8.4
XRN2Q9H0D6 RPLP0-224ENST00000551914 402 ntTSL 311.61□□□□□ -0.555e-6■□□□□ 8.4
XRN2Q9H0D6 LYRM1-210ENST00000568820 1695 ntTSL 1 (best)11.59□□□□□ -0.555e-6■□□□□ 8.4
XRN2Q9H0D6 ZKSCAN1-205ENST00000535170 8758 ntTSL 2 BASIC11.5□□□□□ -0.575e-6■□□□□ 8.4
XRN2Q9H0D6 PPIG-202ENST00000409714 2615 ntTSL 1 (best) BASIC11.46□□□□□ -0.585e-6■□□□□ 8.4
XRN2Q9H0D6 ZNF217-204ENST00000437222 746 ntTSL 210.95□□□□□ -0.665e-6■□□□□ 8.4
XRN2Q9H0D6 RPLP0-211ENST00000548495 651 ntTSL 310.89□□□□□ -0.675e-6■□□□□ 8.4
XRN2Q9H0D6 UBAP2L-207ENST00000428931 3988 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.685e-6■□□□□ 8.4
XRN2Q9H0D6 SH3YL1-214ENST00000465733 551 ntTSL 410.34□□□□□ -0.755e-6■□□□□ 8.4
XRN2Q9H0D6 SH3YL1-218ENST00000472861 441 ntTSL 310.34□□□□□ -0.755e-6■□□□□ 8.4
XRN2Q9H0D6 SUPT5H-211ENST00000598459 548 ntTSL 510.33□□□□□ -0.765e-6■□□□□ 8.4
XRN2Q9H0D6 UBAP2L-201ENST00000271877 3997 ntTSL 5 BASIC10.05□□□□□ -0.85e-6■□□□□ 8.4
XRN2Q9H0D6 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.815e-6■□□□□ 8.4
XRN2Q9H0D6 NEDD4L-206ENST00000431212 3338 ntTSL 1 (best) BASIC9.84□□□□□ -0.835e-6■□□□□ 8.4
XRN2Q9H0D6 INSR-202ENST00000341500 8954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.925e-6■□□□□ 8.4
XRN2Q9H0D6 ZKSCAN1-201ENST00000324306 9418 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.925e-6■□□□□ 8.4
XRN2Q9H0D6 FAT1-201ENST00000441802 14786 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.925e-6■□□□□ 8.4
XRN2Q9H0D6 LYRM1-204ENST00000439021 1558 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.955e-6■□□□□ 8.4
XRN2Q9H0D6 NEDD4L-203ENST00000357895 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.955e-6■□□□□ 8.4
XRN2Q9H0D6 UBAP2L-202ENST00000343815 3411 ntTSL 1 (best) BASIC9.09□□□□□ -0.955e-6■□□□□ 8.4
XRN2Q9H0D6 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC8.58□□□□□ -1.045e-6■□□□□ 8.4
XRN2Q9H0D6 SH3YL1-215ENST00000468321 2739 ntTSL 1 (best)8.56□□□□□ -1.045e-6■□□□□ 8.4
XRN2Q9H0D6 NEDD4L-214ENST00000586263 3347 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.055e-6■□□□□ 8.4
XRN2Q9H0D6 SH3YL1-202ENST00000402632 3151 ntTSL 1 (best) BASIC8.43□□□□□ -1.065e-6■□□□□ 8.4
XRN2Q9H0D6 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC8.4□□□□□ -1.075e-6■□□□□ 8.4
XRN2Q9H0D6 UBAP2L-220ENST00000613315 3451 ntTSL 2 BASIC8.37□□□□□ -1.075e-6■□□□□ 8.4
XRN2Q9H0D6 FAT1-212ENST00000614102 14758 ntAPPRIS ALT1 TSL 5 BASIC8.13□□□□□ -1.115e-6■□□□□ 8.4
XRN2Q9H0D6 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC7.99□□□□□ -1.136e-10■□□□□ 8.4
XRN2Q9H0D6 SUPT5H-205ENST00000593727 493 ntTSL 37.86□□□□□ -1.155e-6■□□□□ 8.4
XRN2Q9H0D6 ABCA5-205ENST00000587607 804 ntTSL 1 (best)7.54□□□□□ -1.25e-6■□□□□ 8.4
XRN2Q9H0D6 SH3YL1-212ENST00000462719 569 ntTSL 46.62□□□□□ -1.355e-6■□□□□ 8.4
XRN2Q9H0D6 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.47□□□□□ -1.375e-6■□□□□ 8.4
XRN2Q9H0D6 SH3YL1-207ENST00000415368 494 ntTSL 36.39□□□□□ -1.395e-6■□□□□ 8.4
XRN2Q9H0D6 PPIG-206ENST00000433207 1485 ntTSL 1 (best)5.68□□□□□ -1.55e-6■□□□□ 8.4
XRN2Q9H0D6 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.625e-6■□□□□ 8.4
XRN2Q9H0D6 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.775e-6■□□□□ 8.4
XRN2Q9H0D6 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.195e-6■□□□□ 8.4
XRN2Q9H0D6 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC15.69■□□□□ 0.13e-20■□□□□ 8.4
XRN2Q9H0D6 LINC00106-201ENST00000430235 370 ntTSL 2 BASIC14.36□□□□□ -0.112e-10■□□□□ 8.4
XRN2Q9H0D6 LINC00106-202ENST00000434938 356 ntTSL 5 BASIC13.26□□□□□ -0.292e-10■□□□□ 8.4
XRN2Q9H0D6 ECHDC2-223ENST00000542552 981 ntTSL 1 (best)18.19■□□□□ 0.56e-7■□□□□ 8.4
XRN2Q9H0D6 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.356e-7■□□□□ 8.4
XRN2Q9H0D6 TEN1-CDK3-201ENST00000567351 3897 ntTSL 215.47■□□□□ 0.076e-7■□□□□ 8.4
Retrieved 100 of 21,068 protein–RNA pairs in 534.2 ms