RNA–Protein interactions for RNA: ENST00000569023.5

LYRM1-211, Transcript of LYR motif containing 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LYRM1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-211ENST00000569023 AEBP2Q6ZN18 517 aaPredicted RBP16.39■□□□□ 0.21
LYRM1-211ENST00000569023 CHIC1Q5VXU3 224 aa15.85■□□□□ 0.13
LYRM1-211ENST00000569023 PHF23Q9BUL5 403 aaPredicted RBP13.99□□□□□ -0.17
LYRM1-211ENST00000569023 NISCHQ9Y2I1 1504 aa13.85□□□□□ -0.19
LYRM1-211ENST00000569023 SENP3Q9H4L4 574 aaPredicted RBP13.82□□□□□ -0.2
LYRM1-211ENST00000569023 FOXD1Q16676 465 aa12.9□□□□□ -0.34
LYRM1-211ENST00000569023 PLPPR3Q6T4P5 718 aa12.78□□□□□ -0.36
LYRM1-211ENST00000569023 PPP6R1Q9UPN7 881 aa12.37□□□□□ -0.43
LYRM1-211ENST00000569023 ADRA2BP18089 450 aa12.34□□□□□ -0.43
LYRM1-211ENST00000569023 PIAS4Q8N2W9 510 aaPredicted RBP12.12□□□□□ -0.47
LYRM1-211ENST00000569023 CCDC180Q9P1Z9 1646 aa12.11□□□□□ -0.47
LYRM1-211ENST00000569023 MSH5O43196 834 aa11.85□□□□□ -0.51
LYRM1-211ENST00000569023 ABCC9O60706 1549 aa11.69□□□□□ -0.54
LYRM1-211ENST00000569023 ZCCHC6Q5VYS8 1495 aaKnown RBP11.6□□□□□ -0.55
LYRM1-211ENST00000569023 DCAF1Q9Y4B6 1507 aa11.43□□□□□ -0.58
LYRM1-211ENST00000569023 DCAF8L2P0C7V8 631 aa11.38□□□□□ -0.59
LYRM1-211ENST00000569023 MYO15BQ96JP2 1530 aa11.36□□□□□ -0.59
LYRM1-211ENST00000569023 NACADO15069 1562 aa11.33□□□□□ -0.6
LYRM1-211ENST00000569023 PPP4R3CPQ6ZMV5 832 aa11.29□□□□□ -0.6
LYRM1-211ENST00000569023 RB1CC1Q8TDY2 1594 aa11.26□□□□□ -0.61
LYRM1-211ENST00000569023 MAPK8IP2Q13387 824 aaPredicted RBP11.23□□□□□ -0.61
LYRM1-211ENST00000569023 SCRIBQ14160 1630 aa11.14□□□□□ -0.63
LYRM1-211ENST00000569023 SHROOM4Q9ULL8 1493 aa11.13□□□□□ -0.63
LYRM1-211ENST00000569023 SCAF1Q9H7N4 1312 aaKnown RBP11.13□□□□□ -0.63
LYRM1-211ENST00000569023 UNC13AQ9UPW8 1703 aa11.08□□□□□ -0.64
LYRM1-211ENST00000569023 BICRAQ9NZM4 1560 aa11.07□□□□□ -0.64
LYRM1-211ENST00000569023 DMRT2Q9Y5R5 561 aa11.04□□□□□ -0.64
LYRM1-211ENST00000569023 POTEDQ86YR6 584 aa11.03□□□□□ -0.64
LYRM1-211ENST00000569023 PABPN1Q86U42 306 aaKnown RBP eCLIP11□□□□□ -0.65
LYRM1-211ENST00000569023 KCNA4P22459 653 aa10.97□□□□□ -0.65
LYRM1-211ENST00000569023 CNKSR2Q8WXI2 1034 aa10.95□□□□□ -0.66
LYRM1-211ENST00000569023 NCBP3Q53F19 620 aaKnown RBP10.88□□□□□ -0.67
LYRM1-211ENST00000569023 CECR2Q9BXF3 1484 aa10.84□□□□□ -0.67
LYRM1-211ENST00000569023 NPM3O75607 178 aaKnown RBP10.83□□□□□ -0.68
LYRM1-211ENST00000569023 HOXD11P31277 338 aaPredicted RBP10.77□□□□□ -0.69
LYRM1-211ENST00000569023 RNF216Q9NWF9 866 aaPredicted RBP10.77□□□□□ -0.69
LYRM1-211ENST00000569023 MROH2BQ7Z745 1585 aa10.73□□□□□ -0.69
LYRM1-211ENST00000569023 RSF1Q96T23 1441 aaPredicted RBP10.68□□□□□ -0.7
LYRM1-211ENST00000569023 EIF4G1Q04637 1599 aaKnown RBP10.68□□□□□ -0.7
LYRM1-211ENST00000569023 SMARCA4P51532 1647 aa10.67□□□□□ -0.7
LYRM1-211ENST00000569023 BAZ1AQ9NRL2 1556 aaPredicted RBP10.65□□□□□ -0.71
LYRM1-211ENST00000569023 DNAJC5BQ9UF47 199 aa10.63□□□□□ -0.71
LYRM1-211ENST00000569023 WIZO95785 1651 aa10.59□□□□□ -0.71
LYRM1-211ENST00000569023 ATAD2BQ9ULI0 1458 aa10.57□□□□□ -0.72
LYRM1-211ENST00000569023 CC2D2AQ9P2K1 1620 aa10.57□□□□□ -0.72
LYRM1-211ENST00000569023 PEG3Q9GZU2 1588 aa10.56□□□□□ -0.72
LYRM1-211ENST00000569023 DCAF8L1A6NGE4 600 aa10.56□□□□□ -0.72
LYRM1-211ENST00000569023 SUPT5HO00267 1087 aaKnown RBP10.54□□□□□ -0.72
LYRM1-211ENST00000569023 NCAPD3P42695 1498 aa10.51□□□□□ -0.73
LYRM1-211ENST00000569023 SMARCA2P51531 1590 aa10.48□□□□□ -0.73
LYRM1-211ENST00000569023 TOP2AP11388 1531 aaKnown RBP10.45□□□□□ -0.74
LYRM1-211ENST00000569023 HMGXB3Q12766 1538 aa10.45□□□□□ -0.74
LYRM1-211ENST00000569023 BAZ1BQ9UIG0 1483 aaKnown RBP10.43□□□□□ -0.74
LYRM1-211ENST00000569023 CCDC88BA6NC98 1476 aa10.38□□□□□ -0.75
LYRM1-211ENST00000569023 SLC4A1APQ9BWU0 796 aaKnown RBP10.37□□□□□ -0.75
LYRM1-211ENST00000569023 SLC4A2P04920 1241 aa10.27□□□□□ -0.77
LYRM1-211ENST00000569023 NESP48681 1621 aa10.25□□□□□ -0.77
LYRM1-211ENST00000569023 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.23□□□□□ -0.772e-6■■□□□ 11.8
LYRM1-211ENST00000569023 CFTRP13569 1480 aa10.22□□□□□ -0.77
LYRM1-211ENST00000569023 RNF39Q9H2S5 420 aa10.2□□□□□ -0.78
LYRM1-211ENST00000569023 CADPSQ9ULU8 1353 aa10.2□□□□□ -0.78
LYRM1-211ENST00000569023 ZBTB22O15209 634 aa10.14□□□□□ -0.79
LYRM1-211ENST00000569023 U3KPZ7 1027 aaPredicted RBP10.13□□□□□ -0.79
LYRM1-211ENST00000569023 LAMC3Q9Y6N6 1575 aa10.12□□□□□ -0.79
LYRM1-211ENST00000569023 ABCC8Q09428 1581 aa10.09□□□□□ -0.79
LYRM1-211ENST00000569023 FANCD2Q9BXW9 1451 aa10.08□□□□□ -0.8
LYRM1-211ENST00000569023 FOXD4L1Q9NU39 408 aa10.06□□□□□ -0.8
LYRM1-211ENST00000569023 PRDM2Q13029 1718 aa10.06□□□□□ -0.8
LYRM1-211ENST00000569023 KIF21AQ7Z4S6 1674 aa10.06□□□□□ -0.8
LYRM1-211ENST00000569023 CUX1P39880 1505 aa10.04□□□□□ -0.8
LYRM1-211ENST00000569023 URB2Q14146 1524 aaKnown RBP10.03□□□□□ -0.8
LYRM1-211ENST00000569023 SYNJ1O43426 1573 aa10.03□□□□□ -0.8
LYRM1-211ENST00000569023 PDS5BQ9NTI5 1447 aa10.03□□□□□ -0.8
LYRM1-211ENST00000569023 C1QBPQ07021 282 aaKnown RBP10.01□□□□□ -0.81
LYRM1-211ENST00000569023 EHMT2Q96KQ7 1210 aa10.01□□□□□ -0.81
LYRM1-211ENST00000569023 CEP164Q9UPV0 1460 aa10.01□□□□□ -0.81
LYRM1-211ENST00000569023 WRNQ14191 1432 aaPredicted RBP eCLIP9.99□□□□□ -0.81
LYRM1-211ENST00000569023 THOC2Q8NI27 1593 aaKnown RBP9.99□□□□□ -0.81
LYRM1-211ENST00000569023 MRC2Q9UBG0 1479 aa9.97□□□□□ -0.81
LYRM1-211ENST00000569023 TOPBP1Q92547 1522 aa9.97□□□□□ -0.81
LYRM1-211ENST00000569023 MYCNP04198 464 aaPredicted RBP9.96□□□□□ -0.82
LYRM1-211ENST00000569023 CACNB1Q02641 598 aaPredicted RBP9.96□□□□□ -0.82
LYRM1-211ENST00000569023 CSRNP3Q8WYN3 585 aa9.95□□□□□ -0.82
LYRM1-211ENST00000569023 ERCC6Q03468 1493 aa9.95□□□□□ -0.82
LYRM1-211ENST00000569023 WDR62O43379 1518 aa9.95□□□□□ -0.82
LYRM1-211ENST00000569023 DNMBPQ6XZF7 1577 aa9.95□□□□□ -0.82
LYRM1-211ENST00000569023 TOP2BQ02880 1626 aa9.95□□□□□ -0.82
LYRM1-211ENST00000569023 BIVM-ERCC5R4GMW8 1640 aa9.95□□□□□ -0.82
LYRM1-211ENST00000569023 CUX2O14529 1486 aa9.92□□□□□ -0.82
LYRM1-211ENST00000569023 FGD5Q6ZNL6 1462 aa9.92□□□□□ -0.82
LYRM1-211ENST00000569023 POLA1P09884 1462 aaPredicted RBP9.91□□□□□ -0.82
LYRM1-211ENST00000569023 RAD54L2Q9Y4B4 1467 aa9.9□□□□□ -0.83
LYRM1-211ENST00000569023 TRIM41Q8WV44 630 aa9.89□□□□□ -0.83
LYRM1-211ENST00000569023 SPINK5Q9NQ38 1064 aaPredicted RBP9.89□□□□□ -0.83
LYRM1-211ENST00000569023 RUSC2Q8N2Y8 1516 aa9.88□□□□□ -0.83
LYRM1-211ENST00000569023 SOGA1O94964 1423 aa9.87□□□□□ -0.83
LYRM1-211ENST00000569023 TARBP1Q13395 1621 aaKnown RBP9.86□□□□□ -0.83
LYRM1-211ENST00000569023 ZNF608Q9ULD9 1512 aaPredicted RBP9.83□□□□□ -0.84
LYRM1-211ENST00000569023 WDR97A6NE52 1622 aa9.83□□□□□ -0.84
LYRM1-211ENST00000569023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms