RNA–Protein interactions for RNA: ENST00000587881.1

NEDD4L-220, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,984 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-220ENST00000587881 NISCHQ9Y2I1 1504 aa29.8■■■□□ 2.36
NEDD4L-220ENST00000587881 CCDC180Q9P1Z9 1646 aa25.43■■□□□ 1.66
NEDD4L-220ENST00000587881 SHROOM4Q9ULL8 1493 aa25.21■■□□□ 1.63
NEDD4L-220ENST00000587881 ZCCHC6Q5VYS8 1495 aaKnown RBP25.2■■□□□ 1.62
NEDD4L-220ENST00000587881 SUPT5HO00267 1087 aaKnown RBP24.78■■□□□ 1.56
NEDD4L-220ENST00000587881 DCAF1Q9Y4B6 1507 aa24.56■■□□□ 1.52
NEDD4L-220ENST00000587881 DCAF8L2P0C7V8 631 aa24.54■■□□□ 1.52
NEDD4L-220ENST00000587881 CHIC1Q5VXU3 224 aa24.19■■□□□ 1.46
NEDD4L-220ENST00000587881 MYO15BQ96JP2 1530 aa24■■□□□ 1.43
NEDD4L-220ENST00000587881 ABCC9O60706 1549 aa23.78■■□□□ 1.4
NEDD4L-220ENST00000587881 SCRIBQ14160 1630 aa23.66■■□□□ 1.38
NEDD4L-220ENST00000587881 RSF1Q96T23 1441 aaPredicted RBP23.56■■□□□ 1.36
NEDD4L-220ENST00000587881 NACADO15069 1562 aa23.49■■□□□ 1.35
NEDD4L-220ENST00000587881 HRCP23327 699 aa23.47■■□□□ 1.35
NEDD4L-220ENST00000587881 LOC105371045A0A1W2PR82 267 aa23.38■■□□□ 1.33
NEDD4L-220ENST00000587881 PCGF6Q9BYE7 350 aa23.38■■□□□ 1.33
NEDD4L-220ENST00000587881 RB1CC1Q8TDY2 1594 aa23.36■■□□□ 1.33
NEDD4L-220ENST00000587881 TRIM41Q8WV44 630 aa23.18■■□□□ 1.3
NEDD4L-220ENST00000587881 CECR2Q9BXF3 1484 aa23.15■■□□□ 1.3
NEDD4L-220ENST00000587881 MROH2BQ7Z745 1585 aa23.1■■□□□ 1.29
NEDD4L-220ENST00000587881 TRIM26Q12899 539 aaPredicted RBP23.06■■□□□ 1.28
NEDD4L-220ENST00000587881 WIZO95785 1651 aa22.99■■□□□ 1.27
NEDD4L-220ENST00000587881 BAZ1AQ9NRL2 1556 aaPredicted RBP22.91■■□□□ 1.26
NEDD4L-220ENST00000587881 FAM9AQ8IZU1 332 aaPredicted RBP22.85■■□□□ 1.25
NEDD4L-220ENST00000587881 PPARGC1BQ86YN6 1023 aaKnown RBP22.82■■□□□ 1.24
NEDD4L-220ENST00000587881 EIF4G1Q04637 1599 aaKnown RBP22.71■■□□□ 1.23
NEDD4L-220ENST00000587881 UNC13AQ9UPW8 1703 aa22.7■■□□□ 1.22
NEDD4L-220ENST00000587881 TOP2AP11388 1531 aaKnown RBP22.7■■□□□ 1.22
NEDD4L-220ENST00000587881 SMARCA4P51532 1647 aa22.69■■□□□ 1.22
NEDD4L-220ENST00000587881 ZEB1P37275 1124 aaPredicted RBP22.65■■□□□ 1.22
NEDD4L-220ENST00000587881 EHMT2Q96KQ7 1210 aa22.56■■□□□ 1.2
NEDD4L-220ENST00000587881 CCDC88BA6NC98 1476 aa22.56■■□□□ 1.2
NEDD4L-220ENST00000587881 SMARCA2P51531 1590 aa22.54■■□□□ 1.2
NEDD4L-220ENST00000587881 ABCC8Q09428 1581 aa22.43■■□□□ 1.18
NEDD4L-220ENST00000587881 BICRAQ9NZM4 1560 aa22.38■■□□□ 1.17
NEDD4L-220ENST00000587881 PEG3Q9GZU2 1588 aa22.32■■□□□ 1.16
NEDD4L-220ENST00000587881 EEA1Q15075 1411 aa22.3■■□□□ 1.16
NEDD4L-220ENST00000587881 PABPN1Q86U42 306 aaKnown RBP eCLIP22.29■■□□□ 1.165e-29■■■□□ 15.4
NEDD4L-220ENST00000587881 WRNQ14191 1432 aaPredicted RBP eCLIP22.24■■□□□ 1.15
NEDD4L-220ENST00000587881 SOGA1O94964 1423 aa22.24■■□□□ 1.15
NEDD4L-220ENST00000587881 TNIKQ9UKE5 1360 aa22.22■■□□□ 1.15
NEDD4L-220ENST00000587881 CSRNP3Q8WYN3 585 aa22.2■■□□□ 1.14
NEDD4L-220ENST00000587881 CEP162Q5TB80 1403 aa22.18■■□□□ 1.14
NEDD4L-220ENST00000587881 RUSC2Q8N2Y8 1516 aa22.1■■□□□ 1.13
NEDD4L-220ENST00000587881 ATAD2BQ9ULI0 1458 aa22.09■■□□□ 1.13
NEDD4L-220ENST00000587881 GOLGA3Q08378 1498 aa22.07■■□□□ 1.12
NEDD4L-220ENST00000587881 UBTFP17480 764 aaKnown RBP22.06■■□□□ 1.12
NEDD4L-220ENST00000587881 BAZ1BQ9UIG0 1483 aaKnown RBP22.03■■□□□ 1.12
NEDD4L-220ENST00000587881 CCER1Q8TC90 406 aaPredicted RBP22.01■■□□□ 1.11
NEDD4L-220ENST00000587881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.01■■□□□ 1.11
NEDD4L-220ENST00000587881 SYNJ1O43426 1573 aa21.99■■□□□ 1.11
NEDD4L-220ENST00000587881 CEP164Q9UPV0 1460 aa21.96■■□□□ 1.11
NEDD4L-220ENST00000587881 KIF21BO75037 1637 aa21.95■■□□□ 1.1
NEDD4L-220ENST00000587881 TTBK1Q5TCY1 1321 aaPredicted RBP21.85■■□□□ 1.09
NEDD4L-220ENST00000587881 TOP2BQ02880 1626 aa21.8■■□□□ 1.08
NEDD4L-220ENST00000587881 CLIP1P30622 1438 aa21.79■■□□□ 1.08
NEDD4L-220ENST00000587881 BIVM-ERCC5R4GMW8 1640 aa21.73■■□□□ 1.07
NEDD4L-220ENST00000587881 VPS8Q8N3P4 1428 aa21.72■■□□□ 1.07
NEDD4L-220ENST00000587881 HMGXB3Q12766 1538 aa21.71■■□□□ 1.07
NEDD4L-220ENST00000587881 RAPGEF2Q9Y4G8 1499 aa21.71■■□□□ 1.07
NEDD4L-220ENST00000587881 NCAPD3P42695 1498 aa21.71■■□□□ 1.07
NEDD4L-220ENST00000587881 APLP2Q06481 763 aa21.64■■□□□ 1.05
NEDD4L-220ENST00000587881 ERICH3Q5RHP9 1530 aa21.61■■□□□ 1.05
NEDD4L-220ENST00000587881 DIEXFQ68CQ4 756 aaKnown RBP21.61■■□□□ 1.05
NEDD4L-220ENST00000587881 PRXQ9BXM0 1461 aa21.57■■□□□ 1.04
NEDD4L-220ENST00000587881 SCAF1Q9H7N4 1312 aaKnown RBP21.55■■□□□ 1.04
NEDD4L-220ENST00000587881 CUX1P39880 1505 aa21.52■■□□□ 1.04
NEDD4L-220ENST00000587881 CFTRP13569 1480 aa21.52■■□□□ 1.04
NEDD4L-220ENST00000587881 HNRNPUL2Q1KMD3 747 aaKnown RBP21.52■■□□□ 1.04
NEDD4L-220ENST00000587881 ZNF316A6NFI3 1004 aaPredicted RBP21.49■■□□□ 1.03
NEDD4L-220ENST00000587881 KIF27Q86VH2 1401 aa21.48■■□□□ 1.03
NEDD4L-220ENST00000587881 RANGAP1P46060 587 aaPredicted RBP21.47■■□□□ 1.03
NEDD4L-220ENST00000587881 ACIN1Q9UKV3 1341 aaKnown RBP21.44■■□□□ 1.02
NEDD4L-220ENST00000587881 PRDM2Q13029 1718 aa21.42■■□□□ 1.02
NEDD4L-220ENST00000587881 ARAP1Q96P48 1450 aa21.42■■□□□ 1.02
NEDD4L-220ENST00000587881 CENPBP07199 599 aaPredicted RBP21.38■■□□□ 1.01
NEDD4L-220ENST00000587881 NEUROD1Q13562 356 aa21.34■■□□□ 1.01
NEDD4L-220ENST00000587881 PELP1Q8IZL8 1130 aaKnown RBP21.31■■□□□ 1
NEDD4L-220ENST00000587881 CLSPNQ9HAW4 1339 aa21.3■■□□□ 1
NEDD4L-220ENST00000587881 CADPSQ9ULU8 1353 aa21.27■■□□□ 1
NEDD4L-220ENST00000587881 KANK4Q5T7N3 995 aaPredicted RBP21.27■□□□□ 0.99
NEDD4L-220ENST00000587881 ARHGAP35Q9NRY4 1499 aa21.24■□□□□ 0.99
NEDD4L-220ENST00000587881 RRBP1Q9P2E9 1410 aaKnown RBP21.23■□□□□ 0.99
NEDD4L-220ENST00000587881 IGF1RP08069 1367 aa21.22■□□□□ 0.99
NEDD4L-220ENST00000587881 CUX2O14529 1486 aa21.22■□□□□ 0.99
NEDD4L-220ENST00000587881 DHX57Q6P158 1386 aaKnown RBP21.17■□□□□ 0.98
NEDD4L-220ENST00000587881 FGD5Q6ZNL6 1462 aa21.14■□□□□ 0.97
NEDD4L-220ENST00000587881 CARMIL1Q5VZK9 1371 aa21.14■□□□□ 0.97
NEDD4L-220ENST00000587881 GTF3C3Q9Y5Q9 886 aa21.14■□□□□ 0.97
NEDD4L-220ENST00000587881 MAP3K1Q13233 1512 aa21.12■□□□□ 0.97
NEDD4L-220ENST00000587881 CCNB3Q8WWL7 1395 aa21.12■□□□□ 0.97
NEDD4L-220ENST00000587881 MIER1Q8N108 512 aa21.1■□□□□ 0.97
NEDD4L-220ENST00000587881 CC2D2AQ9P2K1 1620 aa21.09■□□□□ 0.97
NEDD4L-220ENST00000587881 AEBP2Q6ZN18 517 aaPredicted RBP21.06■□□□□ 0.96
NEDD4L-220ENST00000587881 TIAM1Q13009 1591 aa21.05■□□□□ 0.96
NEDD4L-220ENST00000587881 FANCD2Q9BXW9 1451 aa21.03■□□□□ 0.96
NEDD4L-220ENST00000587881 FHAD1B1AJZ9 1412 aa20.99■□□□□ 0.95
NEDD4L-220ENST00000587881 DNMBPQ6XZF7 1577 aa20.98■□□□□ 0.95
NEDD4L-220ENST00000587881 YTHDC1Q96MU7 727 aaKnown RBP20.97■□□□□ 0.95
NEDD4L-220ENST00000587881 LRRC9Q6ZRR7 1453 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms