RNA–Protein interactions for RNA: ENST00000568820.5

LYRM1-210, Transcript of LYR motif containing 1, humanhuman

TSL 1 (best)

Gene LYRM1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1-210ENST00000568820 AEBP2Q6ZN18 517 aaPredicted RBP32.2■■■□□ 2.74
LYRM1-210ENST00000568820 CHIC1Q5VXU3 224 aa31.41■■■□□ 2.62
LYRM1-210ENST00000568820 PHF23Q9BUL5 403 aaPredicted RBP27.6■■■□□ 2.01
LYRM1-210ENST00000568820 SENP3Q9H4L4 574 aaPredicted RBP27.36■■□□□ 1.97
LYRM1-210ENST00000568820 PLPPR3Q6T4P5 718 aa25.46■■□□□ 1.67
LYRM1-210ENST00000568820 FOXD1Q16676 465 aa25.37■■□□□ 1.65
LYRM1-210ENST00000568820 NISCHQ9Y2I1 1504 aa24.58■■□□□ 1.53
LYRM1-210ENST00000568820 PPP6R1Q9UPN7 881 aa24.35■■□□□ 1.49
LYRM1-210ENST00000568820 ADRA2BP18089 450 aa24.3■■□□□ 1.48
LYRM1-210ENST00000568820 PIAS4Q8N2W9 510 aaPredicted RBP23.89■■□□□ 1.41
LYRM1-210ENST00000568820 MSH5O43196 834 aa23.44■■□□□ 1.34
LYRM1-210ENST00000568820 PPP4R3CPQ6ZMV5 832 aa22.42■■□□□ 1.18
LYRM1-210ENST00000568820 SCAF1Q9H7N4 1312 aaKnown RBP22.27■■□□□ 1.16
LYRM1-210ENST00000568820 MAPK8IP2Q13387 824 aaPredicted RBP22.06■■□□□ 1.12
LYRM1-210ENST00000568820 DMRT2Q9Y5R5 561 aa21.84■■□□□ 1.09
LYRM1-210ENST00000568820 CNKSR2Q8WXI2 1034 aa21.82■■□□□ 1.08
LYRM1-210ENST00000568820 NCBP3Q53F19 620 aaKnown RBP21.82■■□□□ 1.08
LYRM1-210ENST00000568820 KCNA4P22459 653 aa21.81■■□□□ 1.08
LYRM1-210ENST00000568820 NPM3O75607 178 aaKnown RBP21.5■■□□□ 1.03
LYRM1-210ENST00000568820 POTEDQ86YR6 584 aa21.44■■□□□ 1.02
LYRM1-210ENST00000568820 RNF216Q9NWF9 866 aaPredicted RBP21.42■■□□□ 1.02
LYRM1-210ENST00000568820 HOXD11P31277 338 aaPredicted RBP21.37■■□□□ 1.01
LYRM1-210ENST00000568820 CCDC180Q9P1Z9 1646 aa21.32■■□□□ 1
LYRM1-210ENST00000568820 DNAJC5BQ9UF47 199 aa21■□□□□ 0.95
LYRM1-210ENST00000568820 DCAF8L1A6NGE4 600 aa20.77■□□□□ 0.92
LYRM1-210ENST00000568820 SLC4A1APQ9BWU0 796 aaKnown RBP20.76■□□□□ 0.91
LYRM1-210ENST00000568820 ZCCHC6Q5VYS8 1495 aaKnown RBP20.69■□□□□ 0.9
LYRM1-210ENST00000568820 DCAF1Q9Y4B6 1507 aa20.37■□□□□ 0.85
LYRM1-210ENST00000568820 SLC4A2P04920 1241 aa20.32■□□□□ 0.84
LYRM1-210ENST00000568820 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.29■□□□□ 0.84
LYRM1-210ENST00000568820 DCAF8L2P0C7V8 631 aa20.27■□□□□ 0.84
LYRM1-210ENST00000568820 SHROOM4Q9ULL8 1493 aa20.19■□□□□ 0.82
LYRM1-210ENST00000568820 FOXD4L1Q9NU39 408 aa20.12■□□□□ 0.81
LYRM1-210ENST00000568820 ZBTB22O15209 634 aa20.09■□□□□ 0.81
LYRM1-210ENST00000568820 RNF39Q9H2S5 420 aa20.08■□□□□ 0.81
LYRM1-210ENST00000568820 MYO15BQ96JP2 1530 aa20.06■□□□□ 0.8
LYRM1-210ENST00000568820 EHMT2Q96KQ7 1210 aa20.03■□□□□ 0.8
LYRM1-210ENST00000568820 U3KPZ7 1027 aaPredicted RBP20■□□□□ 0.79
LYRM1-210ENST00000568820 ABCC9O60706 1549 aa19.94■□□□□ 0.78
LYRM1-210ENST00000568820 CSRNP3Q8WYN3 585 aa19.91■□□□□ 0.78
LYRM1-210ENST00000568820 MYCNP04198 464 aaPredicted RBP19.88■□□□□ 0.77
LYRM1-210ENST00000568820 C1QBPQ07021 282 aaKnown RBP19.84■□□□□ 0.77
LYRM1-210ENST00000568820 NACADO15069 1562 aa19.84■□□□□ 0.77
LYRM1-210ENST00000568820 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.73■□□□□ 0.75
LYRM1-210ENST00000568820 HNRNPUL2Q1KMD3 747 aaKnown RBP19.73■□□□□ 0.75
LYRM1-210ENST00000568820 SAMD1Q6SPF0 538 aaPredicted RBP19.66■□□□□ 0.74
LYRM1-210ENST00000568820 RB1CC1Q8TDY2 1594 aa19.61■□□□□ 0.73
LYRM1-210ENST00000568820 SCRIBQ14160 1630 aa19.61■□□□□ 0.73
LYRM1-210ENST00000568820 SUPT5HO00267 1087 aaKnown RBP19.59■□□□□ 0.73
LYRM1-210ENST00000568820 CACNB1Q02641 598 aaPredicted RBP19.55■□□□□ 0.72
LYRM1-210ENST00000568820 APLP2Q06481 763 aa19.55■□□□□ 0.72
LYRM1-210ENST00000568820 ATXN8OSP0DMR3 200 aa19.46■□□□□ 0.71
LYRM1-210ENST00000568820 SPINK5Q9NQ38 1064 aaPredicted RBP19.43■□□□□ 0.7
LYRM1-210ENST00000568820 CAPN15O75808 1086 aa19.33■□□□□ 0.68
LYRM1-210ENST00000568820 ATF5Q9Y2D1 282 aaPredicted RBP19.32■□□□□ 0.68
LYRM1-210ENST00000568820 ZNF219Q9P2Y4 722 aaPredicted RBP19.27■□□□□ 0.67
LYRM1-210ENST00000568820 TRHP20396 242 aaPredicted RBP19.21■□□□□ 0.67
LYRM1-210ENST00000568820 RSF1Q96T23 1441 aaPredicted RBP19.17■□□□□ 0.66
LYRM1-210ENST00000568820 UNC13AQ9UPW8 1703 aa19.08■□□□□ 0.65
LYRM1-210ENST00000568820 DSG3P32926 999 aa19.08■□□□□ 0.64
LYRM1-210ENST00000568820 CECR2Q9BXF3 1484 aa19.04■□□□□ 0.64
LYRM1-210ENST00000568820 BAZ1AQ9NRL2 1556 aaPredicted RBP19■□□□□ 0.63
LYRM1-210ENST00000568820 MROH2BQ7Z745 1585 aa18.97■□□□□ 0.63
LYRM1-210ENST00000568820 ABCB7O75027 752 aa18.95■□□□□ 0.62
LYRM1-210ENST00000568820 BICRAQ9NZM4 1560 aa18.92■□□□□ 0.62
LYRM1-210ENST00000568820 POLA2Q14181 598 aa18.91■□□□□ 0.62
LYRM1-210ENST00000568820 PABPN1Q86U42 306 aaKnown RBP eCLIP18.86■□□□□ 0.61
LYRM1-210ENST00000568820 SMARCA4P51532 1647 aa18.83■□□□□ 0.6
LYRM1-210ENST00000568820 WIZO95785 1651 aa18.8■□□□□ 0.6
LYRM1-210ENST00000568820 TOP2AP11388 1531 aaKnown RBP18.67■□□□□ 0.58
LYRM1-210ENST00000568820 ZBTB12Q9Y330 459 aaPredicted RBP18.66■□□□□ 0.58
LYRM1-210ENST00000568820 PEG3Q9GZU2 1588 aa18.62■□□□□ 0.57
LYRM1-210ENST00000568820 FBLN2P98095 1184 aa18.52■□□□□ 0.56
LYRM1-210ENST00000568820 SMARCA2P51531 1590 aa18.52■□□□□ 0.55
LYRM1-210ENST00000568820 MKRN4PQ13434 485 aaPredicted RBP18.5■□□□□ 0.55
LYRM1-210ENST00000568820 ATAD2BQ9ULI0 1458 aa18.49■□□□□ 0.55
LYRM1-210ENST00000568820 CCDC88BA6NC98 1476 aa18.48■□□□□ 0.55
LYRM1-210ENST00000568820 TRIM41Q8WV44 630 aa18.46■□□□□ 0.55
LYRM1-210ENST00000568820 BAZ1BQ9UIG0 1483 aaKnown RBP18.42■□□□□ 0.54
LYRM1-210ENST00000568820 EIF4G1Q04637 1599 aaKnown RBP18.39■□□□□ 0.53
LYRM1-210ENST00000568820 NCAPD3P42695 1498 aa18.31■□□□□ 0.52
LYRM1-210ENST00000568820 HMGXB3Q12766 1538 aa18.3■□□□□ 0.52
LYRM1-210ENST00000568820 OSCARQ8IYS5 282 aa18.28■□□□□ 0.52
LYRM1-210ENST00000568820 RBM42Q9BTD8 480 aaKnown RBP18.19■□□□□ 0.5
LYRM1-210ENST00000568820 SPDYE2BA6NHP3 402 aa18.15■□□□□ 0.5
LYRM1-210ENST00000568820 SPDYE6P0CI01 402 aa18.15■□□□□ 0.5
LYRM1-210ENST00000568820 SPDYE2Q495Y8 402 aa18.15■□□□□ 0.5
LYRM1-210ENST00000568820 LOC105371045A0A1W2PR82 267 aa18.13■□□□□ 0.49
LYRM1-210ENST00000568820 ABCC8Q09428 1581 aa18.12■□□□□ 0.49
LYRM1-210ENST00000568820 WRNQ14191 1432 aaPredicted RBP eCLIP18.07■□□□□ 0.48
LYRM1-210ENST00000568820 FAM9AQ8IZU1 332 aaPredicted RBP18.06■□□□□ 0.48
LYRM1-210ENST00000568820 CC2D2AQ9P2K1 1620 aa18.04■□□□□ 0.48
LYRM1-210ENST00000568820 SPDYE4A6NLX3 237 aa18.03■□□□□ 0.48
LYRM1-210ENST00000568820 SSUH2Q9Y2M2 353 aa18.02■□□□□ 0.47
LYRM1-210ENST00000568820 ZNF692Q9BU19 519 aaPredicted RBP18■□□□□ 0.47
LYRM1-210ENST00000568820 EEA1Q15075 1411 aa17.99■□□□□ 0.47
LYRM1-210ENST00000568820 FKBP8Q14318 412 aa17.96■□□□□ 0.47
LYRM1-210ENST00000568820 CFTRP13569 1480 aa17.96■□□□□ 0.47
LYRM1-210ENST00000568820 AKT1S1Q96B36 256 aa17.96■□□□□ 0.47
LYRM1-210ENST00000568820 SYNJ1O43426 1573 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms