RNA–Protein interactions for RNA: ENST00000567351.5

TEN1-CDK3-201, Transcript of TEN1-CDK3 readthrough (NMD candidate), humanhuman

TSL 2

Gene TEN1-CDK3, Length 3,897 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TEN1-CDK3-201ENST00000567351 NISCHQ9Y2I1 1504 aa29.55■■■□□ 2.32
TEN1-CDK3-201ENST00000567351 DCAF8L2P0C7V8 631 aa28.08■■■□□ 2.09
TEN1-CDK3-201ENST00000567351 SHROOM4Q9ULL8 1493 aa27.49■■□□□ 1.99
TEN1-CDK3-201ENST00000567351 SUPT5HO00267 1087 aaKnown RBP27.3■■□□□ 1.96
TEN1-CDK3-201ENST00000567351 EHMT2Q96KQ7 1210 aa26.12■■□□□ 1.77
TEN1-CDK3-201ENST00000567351 FAM9AQ8IZU1 332 aaPredicted RBP25.61■■□□□ 1.69
TEN1-CDK3-201ENST00000567351 PCGF6Q9BYE7 350 aa25.39■■□□□ 1.65
TEN1-CDK3-201ENST00000567351 CHIC1Q5VXU3 224 aa25.18■■□□□ 1.62
TEN1-CDK3-201ENST00000567351 LOC105371045A0A1W2PR82 267 aa25.16■■□□□ 1.62
TEN1-CDK3-201ENST00000567351 TTBK1Q5TCY1 1321 aaPredicted RBP25.1■■□□□ 1.61
TEN1-CDK3-201ENST00000567351 TRIM41Q8WV44 630 aa25.02■■□□□ 1.6
TEN1-CDK3-201ENST00000567351 PPARGC1BQ86YN6 1023 aaKnown RBP24.91■■□□□ 1.58
TEN1-CDK3-201ENST00000567351 ABCC9O60706 1549 aa24.8■■□□□ 1.56
TEN1-CDK3-201ENST00000567351 RANGAP1P46060 587 aaPredicted RBP24.73■■□□□ 1.55
TEN1-CDK3-201ENST00000567351 ZCCHC6Q5VYS8 1495 aaKnown RBP24.65■■□□□ 1.54
TEN1-CDK3-201ENST00000567351 PABPN1Q86U42 306 aaKnown RBP eCLIP24.46■■□□□ 1.51
TEN1-CDK3-201ENST00000567351 UBTFP17480 764 aaKnown RBP24.33■■□□□ 1.48
TEN1-CDK3-201ENST00000567351 HRCP23327 699 aa24.32■■□□□ 1.48
TEN1-CDK3-201ENST00000567351 MYO15BQ96JP2 1530 aa24.22■■□□□ 1.47
TEN1-CDK3-201ENST00000567351 TRIM26Q12899 539 aaPredicted RBP24.18■■□□□ 1.46
TEN1-CDK3-201ENST00000567351 SCRIBQ14160 1630 aa24.17■■□□□ 1.46
TEN1-CDK3-201ENST00000567351 CCDC180Q9P1Z9 1646 aa24.16■■□□□ 1.46
TEN1-CDK3-201ENST00000567351 CCER1Q8TC90 406 aaPredicted RBP24.11■■□□□ 1.45
TEN1-CDK3-201ENST00000567351 APLP2Q06481 763 aa24.06■■□□□ 1.44
TEN1-CDK3-201ENST00000567351 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.89■■□□□ 1.41
TEN1-CDK3-201ENST00000567351 ATP1B4Q9UN42 357 aaPredicted RBP23.85■■□□□ 1.41
TEN1-CDK3-201ENST00000567351 HNRNPUL2Q1KMD3 747 aaKnown RBP23.74■■□□□ 1.39
TEN1-CDK3-201ENST00000567351 RSF1Q96T23 1441 aaPredicted RBP23.73■■□□□ 1.39
TEN1-CDK3-201ENST00000567351 ZEB1P37275 1124 aaPredicted RBP23.68■■□□□ 1.38
TEN1-CDK3-201ENST00000567351 ITGAEP38570 1179 aa23.62■■□□□ 1.37
TEN1-CDK3-201ENST00000567351 CECR2Q9BXF3 1484 aa23.6■■□□□ 1.37
TEN1-CDK3-201ENST00000567351 YTHDC1Q96MU7 727 aaKnown RBP23.54■■□□□ 1.36
TEN1-CDK3-201ENST00000567351 CSRNP3Q8WYN3 585 aa23.38■■□□□ 1.33
TEN1-CDK3-201ENST00000567351 DCAF1Q9Y4B6 1507 aa23.31■■□□□ 1.32
TEN1-CDK3-201ENST00000567351 RB1CC1Q8TDY2 1594 aa23.26■■□□□ 1.31
TEN1-CDK3-201ENST00000567351 MROH2BQ7Z745 1585 aa23.21■■□□□ 1.31
TEN1-CDK3-201ENST00000567351 P3H3Q8IVL6 736 aa23.15■■□□□ 1.3
TEN1-CDK3-201ENST00000567351 NACADO15069 1562 aa23.09■■□□□ 1.29
TEN1-CDK3-201ENST00000567351 DIEXFQ68CQ4 756 aaKnown RBP23.09■■□□□ 1.29
TEN1-CDK3-201ENST00000567351 CENPBP07199 599 aaPredicted RBP23.06■■□□□ 1.28
TEN1-CDK3-201ENST00000567351 WIZO95785 1651 aa22.94■■□□□ 1.26
TEN1-CDK3-201ENST00000567351 FAM50AQ14320 339 aaKnown RBP22.94■■□□□ 1.26
TEN1-CDK3-201ENST00000567351 SOGA1O94964 1423 aa22.93■■□□□ 1.26
TEN1-CDK3-201ENST00000567351 ARID3CA6NKF2 412 aa22.92■■□□□ 1.26
TEN1-CDK3-201ENST00000567351 ABCC8Q09428 1581 aa22.91■■□□□ 1.26
TEN1-CDK3-201ENST00000567351 NEUROD1Q13562 356 aa22.83■■□□□ 1.25
TEN1-CDK3-201ENST00000567351 CCDC88BA6NC98 1476 aa22.83■■□□□ 1.24
TEN1-CDK3-201ENST00000567351 CNGB1Q14028 1251 aaPredicted RBP22.82■■□□□ 1.24
TEN1-CDK3-201ENST00000567351 CEP162Q5TB80 1403 aa22.8■■□□□ 1.24
TEN1-CDK3-201ENST00000567351 BAZ1AQ9NRL2 1556 aaPredicted RBP22.8■■□□□ 1.24
TEN1-CDK3-201ENST00000567351 WRNQ14191 1432 aaPredicted RBP eCLIP22.75■■□□□ 1.23
TEN1-CDK3-201ENST00000567351 ZNF316A6NFI3 1004 aaPredicted RBP22.66■■□□□ 1.22
TEN1-CDK3-201ENST00000567351 PELP1Q8IZL8 1130 aaKnown RBP22.66■■□□□ 1.22
TEN1-CDK3-201ENST00000567351 GTF3C3Q9Y5Q9 886 aa22.65■■□□□ 1.22
TEN1-CDK3-201ENST00000567351 RUSC2Q8N2Y8 1516 aa22.64■■□□□ 1.22
TEN1-CDK3-201ENST00000567351 CLIP1P30622 1438 aa22.64■■□□□ 1.21
TEN1-CDK3-201ENST00000567351 BAZ1BQ9UIG0 1483 aaKnown RBP22.63■■□□□ 1.21
TEN1-CDK3-201ENST00000567351 FBLN2P98095 1184 aa22.6■■□□□ 1.21
TEN1-CDK3-201ENST00000567351 POLR3GLQ9BT43 218 aa22.58■■□□□ 1.2
TEN1-CDK3-201ENST00000567351 TNIKQ9UKE5 1360 aa22.52■■□□□ 1.2
TEN1-CDK3-201ENST00000567351 GOLGA3Q08378 1498 aa22.48■■□□□ 1.19
TEN1-CDK3-201ENST00000567351 TRIM52Q96A61 297 aa22.47■■□□□ 1.19
TEN1-CDK3-201ENST00000567351 HIRIP3Q9BW71 556 aaPredicted RBP22.47■■□□□ 1.19
TEN1-CDK3-201ENST00000567351 SCAF1Q9H7N4 1312 aaKnown RBP22.44■■□□□ 1.18
TEN1-CDK3-201ENST00000567351 ACIN1Q9UKV3 1341 aaKnown RBP22.43■■□□□ 1.18
TEN1-CDK3-201ENST00000567351 MIER1Q8N108 512 aa22.41■■□□□ 1.18
TEN1-CDK3-201ENST00000567351 KANK4Q5T7N3 995 aaPredicted RBP22.38■■□□□ 1.17
TEN1-CDK3-201ENST00000567351 TOP2AP11388 1531 aaKnown RBP22.36■■□□□ 1.17
TEN1-CDK3-201ENST00000567351 CHIC2Q9UKJ5 165 aa22.35■■□□□ 1.17
TEN1-CDK3-201ENST00000567351 SMARCA4P51532 1647 aa22.34■■□□□ 1.17
TEN1-CDK3-201ENST00000567351 BCANQ96GW7 911 aa22.32■■□□□ 1.16
TEN1-CDK3-201ENST00000567351 EEA1Q15075 1411 aa22.32■■□□□ 1.16
TEN1-CDK3-201ENST00000567351 CEP164Q9UPV0 1460 aa22.29■■□□□ 1.16
TEN1-CDK3-201ENST00000567351 ZNF326Q5BKZ1 582 aaKnown RBP22.28■■□□□ 1.16
TEN1-CDK3-201ENST00000567351 ATAD2BQ9ULI0 1458 aa22.25■■□□□ 1.15
TEN1-CDK3-201ENST00000567351 DDX10Q13206 875 aaKnown RBP22.23■■□□□ 1.15
TEN1-CDK3-201ENST00000567351 ZNF777Q9ULD5 760 aaPredicted RBP22.23■■□□□ 1.15
TEN1-CDK3-201ENST00000567351 RAPGEF2Q9Y4G8 1499 aa22.2■■□□□ 1.15
TEN1-CDK3-201ENST00000567351 SMARCA2P51531 1590 aa22.2■■□□□ 1.14
TEN1-CDK3-201ENST00000567351 KIF27Q86VH2 1401 aa22.19■■□□□ 1.14
TEN1-CDK3-201ENST00000567351 MYT1LQ9UL68 1186 aa22.19■■□□□ 1.14
TEN1-CDK3-201ENST00000567351 NEFLP07196 543 aa22.18■■□□□ 1.14
TEN1-CDK3-201ENST00000567351 SIN3AQ96ST3 1273 aa22.16■■□□□ 1.14
TEN1-CDK3-201ENST00000567351 CUX2O14529 1486 aa22.13■■□□□ 1.13
TEN1-CDK3-201ENST00000567351 RRP7BPQ9NSQ0 103 aa22.1■■□□□ 1.13
TEN1-CDK3-201ENST00000567351 VPS8Q8N3P4 1428 aa22.06■■□□□ 1.12
TEN1-CDK3-201ENST00000567351 CARMIL1Q5VZK9 1371 aa22.04■■□□□ 1.12
TEN1-CDK3-201ENST00000567351 MTUS2Q5JR59 1369 aa22.02■■□□□ 1.12
TEN1-CDK3-201ENST00000567351 TDRD9Q8NDG6 1382 aaKnown RBP21.99■■□□□ 1.11
TEN1-CDK3-201ENST00000567351 MYT1Q01538 1121 aa21.99■■□□□ 1.11
TEN1-CDK3-201ENST00000567351 ANP32CO43423 234 aa21.97■■□□□ 1.11
TEN1-CDK3-201ENST00000567351 SENP3-EIF4A1A0A087X0R7 540 aa21.97■■□□□ 1.11
TEN1-CDK3-201ENST00000567351 TONSLQ96HA7 1378 aa21.91■■□□□ 1.1
TEN1-CDK3-201ENST00000567351 CCNB3Q8WWL7 1395 aa21.89■■□□□ 1.1
TEN1-CDK3-201ENST00000567351 DNAJC5BQ9UF47 199 aa21.86■■□□□ 1.09
TEN1-CDK3-201ENST00000567351 SYNJ1O43426 1573 aa21.85■■□□□ 1.09
TEN1-CDK3-201ENST00000567351 CHMP7Q8WUX9 453 aaPredicted RBP21.85■■□□□ 1.09
TEN1-CDK3-201ENST00000567351 CADPSQ9ULU8 1353 aa21.84■■□□□ 1.09
TEN1-CDK3-201ENST00000567351 BICRAQ9NZM4 1560 aa21.79■■□□□ 1.08
TEN1-CDK3-201ENST00000567351 FOXD1Q16676 465 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms