Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NUP43Q8NFH3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NUP43Q8NFH3 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NUP43Q8NFH3 AC144831.1-201ENST00000573312 2656 ntBASIC14.8□□□□□ -0.04
NUP43Q8NFH3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NUP43Q8NFH3 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NUP43Q8NFH3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NUP43Q8NFH3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NUP43Q8NFH3 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.8□□□□□ -0.04
NUP43Q8NFH3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NUP43Q8NFH3 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NUP43Q8NFH3 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.8□□□□□ -0.04
NUP43Q8NFH3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NUP43Q8NFH3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
NUP43Q8NFH3 CETN4P-206ENST00000642099 2168 ntBASIC14.8□□□□□ -0.04
NUP43Q8NFH3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NUP43Q8NFH3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NUP43Q8NFH3 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.8□□□□□ -0.04
NUP43Q8NFH3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
NUP43Q8NFH3 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.8□□□□□ -0.04
NUP43Q8NFH3 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NUP43Q8NFH3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NUP43Q8NFH3 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NUP43Q8NFH3 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 HIST3H2BA-201ENST00000436555 524 ntBASIC14.79□□□□□ -0.04
NUP43Q8NFH3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.79□□□□□ -0.04
NUP43Q8NFH3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.78□□□□□ -0.04
NUP43Q8NFH3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 AL139400.1-201ENST00000366220 510 ntBASIC14.78□□□□□ -0.04
NUP43Q8NFH3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 AC004449.1-201ENST00000564240 433 ntBASIC14.78□□□□□ -0.04
NUP43Q8NFH3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NUP43Q8NFH3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms