Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.95□□□□□ -0.34
SSSCA1O60232 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
SSSCA1O60232 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.95□□□□□ -0.34
SSSCA1O60232 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC12.95□□□□□ -0.34
SSSCA1O60232 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SSSCA1O60232 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC12.95□□□□□ -0.34
SSSCA1O60232 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.95□□□□□ -0.34
SSSCA1O60232 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.95□□□□□ -0.34
SSSCA1O60232 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC12.95□□□□□ -0.34
SSSCA1O60232 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC12.95□□□□□ -0.34
SSSCA1O60232 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC12.95□□□□□ -0.34
SSSCA1O60232 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SSSCA1O60232 DBP-204ENST00000599385 709 ntTSL 3 BASIC12.95□□□□□ -0.34
SSSCA1O60232 AL355877.3-201ENST00000622820 899 ntBASIC12.95□□□□□ -0.34
SSSCA1O60232 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.95□□□□□ -0.34
SSSCA1O60232 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SSSCA1O60232 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SSSCA1O60232 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SSSCA1O60232 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.94□□□□□ -0.34
SSSCA1O60232 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.94□□□□□ -0.34
SSSCA1O60232 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC12.94□□□□□ -0.34
SSSCA1O60232 AC023024.2-201ENST00000623561 1993 ntBASIC12.94□□□□□ -0.34
SSSCA1O60232 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SSSCA1O60232 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
SSSCA1O60232 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
SSSCA1O60232 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC12.94□□□□□ -0.34
SSSCA1O60232 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
SSSCA1O60232 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 AJ011931.1-201ENST00000618749 2492 ntBASIC12.94□□□□□ -0.34
SSSCA1O60232 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 LAGE3P1-201ENST00000425356 484 ntBASIC12.94□□□□□ -0.34
SSSCA1O60232 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.94□□□□□ -0.34
SSSCA1O60232 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.94□□□□□ -0.34
SSSCA1O60232 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC12.94□□□□□ -0.34
SSSCA1O60232 SCARNA2-201ENST00000458748 420 ntBASIC12.94□□□□□ -0.34
SSSCA1O60232 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC12.94□□□□□ -0.34
SSSCA1O60232 MIR4515-201ENST00000584082 81 ntBASIC12.94□□□□□ -0.34
SSSCA1O60232 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC12.94□□□□□ -0.34
SSSCA1O60232 AC066615.1-201ENST00000640911 628 ntBASIC12.94□□□□□ -0.34
SSSCA1O60232 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC12.94□□□□□ -0.34
SSSCA1O60232 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.94□□□□□ -0.34
SSSCA1O60232 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.94□□□□□ -0.34
SSSCA1O60232 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC12.94□□□□□ -0.34
SSSCA1O60232 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 WASH6P-202ENST00000359512 1437 ntBASIC12.94□□□□□ -0.34
SSSCA1O60232 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
SSSCA1O60232 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SSSCA1O60232 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.93□□□□□ -0.34
SSSCA1O60232 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
SSSCA1O60232 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
SSSCA1O60232 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.93□□□□□ -0.34
SSSCA1O60232 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC12.93□□□□□ -0.34
SSSCA1O60232 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms