Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TSPAN4O14817 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TSPAN4O14817 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
TSPAN4O14817 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC13.4□□□□□ -0.26
TSPAN4O14817 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
TSPAN4O14817 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.4□□□□□ -0.26
TSPAN4O14817 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.4□□□□□ -0.26
TSPAN4O14817 AC125634.1-201ENST00000438758 1403 ntBASIC13.4□□□□□ -0.26
TSPAN4O14817 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.4□□□□□ -0.26
TSPAN4O14817 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TSPAN4O14817 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TSPAN4O14817 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TSPAN4O14817 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.4□□□□□ -0.26
TSPAN4O14817 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
TSPAN4O14817 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TSPAN4O14817 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.4□□□□□ -0.26
TSPAN4O14817 CCS-201ENST00000310190 942 ntTSL 5 BASIC13.4□□□□□ -0.26
TSPAN4O14817 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TSPAN4O14817 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TSPAN4O14817 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TSPAN4O14817 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC13.4□□□□□ -0.26
TSPAN4O14817 MINOS1P3-201ENST00000457048 203 ntBASIC13.4□□□□□ -0.26
TSPAN4O14817 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
TSPAN4O14817 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC13.4□□□□□ -0.26
TSPAN4O14817 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC13.4□□□□□ -0.26
TSPAN4O14817 AC074051.2-201ENST00000565115 352 ntBASIC13.4□□□□□ -0.26
TSPAN4O14817 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
TSPAN4O14817 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC13.4□□□□□ -0.26
TSPAN4O14817 MIR3652-201ENST00000579335 131 ntBASIC13.4□□□□□ -0.26
TSPAN4O14817 AL138831.2-201ENST00000606564 490 ntBASIC13.4□□□□□ -0.26
TSPAN4O14817 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.4□□□□□ -0.26
TSPAN4O14817 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TSPAN4O14817 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TSPAN4O14817 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TSPAN4O14817 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TSPAN4O14817 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TSPAN4O14817 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TSPAN4O14817 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TSPAN4O14817 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.4□□□□□ -0.26
TSPAN4O14817 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TSPAN4O14817 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TSPAN4O14817 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TSPAN4O14817 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TSPAN4O14817 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.4□□□□□ -0.26
TSPAN4O14817 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.4□□□□□ -0.26
TSPAN4O14817 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.4□□□□□ -0.26
TSPAN4O14817 LAMA3-202ENST00000313654 10661 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TSPAN4O14817 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TSPAN4O14817 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.4□□□□□ -0.26
TSPAN4O14817 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TSPAN4O14817 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TSPAN4O14817 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TSPAN4O14817 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TSPAN4O14817 AL391256.1-201ENST00000443260 1855 ntBASIC13.4□□□□□ -0.26
TSPAN4O14817 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
TSPAN4O14817 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.27
TSPAN4O14817 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSPAN4O14817 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TSPAN4O14817 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSPAN4O14817 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TSPAN4O14817 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TSPAN4O14817 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSPAN4O14817 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.39□□□□□ -0.27
TSPAN4O14817 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSPAN4O14817 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
TSPAN4O14817 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.39□□□□□ -0.27
TSPAN4O14817 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSPAN4O14817 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSPAN4O14817 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.39□□□□□ -0.27
TSPAN4O14817 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSPAN4O14817 AL118506.1-201ENST00000601296 3082 ntBASIC13.39□□□□□ -0.27
TSPAN4O14817 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.39□□□□□ -0.27
TSPAN4O14817 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.39□□□□□ -0.27
TSPAN4O14817 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSPAN4O14817 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TSPAN4O14817 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSPAN4O14817 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.39□□□□□ -0.27
TSPAN4O14817 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
TSPAN4O14817 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TSPAN4O14817 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC13.39□□□□□ -0.27
TSPAN4O14817 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.39□□□□□ -0.27
TSPAN4O14817 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TSPAN4O14817 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSPAN4O14817 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
TSPAN4O14817 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.39□□□□□ -0.27
TSPAN4O14817 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC13.39□□□□□ -0.27
TSPAN4O14817 IGHV3-47-201ENST00000425060 335 ntBASIC13.39□□□□□ -0.27
TSPAN4O14817 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSPAN4O14817 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TSPAN4O14817 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TSPAN4O14817 CDV3-207ENST00000508481 661 ntTSL 3 BASIC13.39□□□□□ -0.27
TSPAN4O14817 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC13.39□□□□□ -0.27
TSPAN4O14817 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.39□□□□□ -0.27
TSPAN4O14817 AP005901.3-202ENST00000581653 237 ntBASIC13.39□□□□□ -0.27
TSPAN4O14817 AC005336.2-201ENST00000593183 939 ntBASIC13.39□□□□□ -0.27
TSPAN4O14817 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC13.39□□□□□ -0.27
TSPAN4O14817 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.39□□□□□ -0.27
TSPAN4O14817 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC13.39□□□□□ -0.27
TSPAN4O14817 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TSPAN4O14817 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms