Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 LINC00552-201ENST00000625151 2579 ntBASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 EMD-201ENST00000369835 966 ntTSL 3 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 ELK2BP-201ENST00000415014 1224 ntBASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 NME3-204ENST00000563498 920 ntTSL 2 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 AL049597.2-201ENST00000565575 961 ntBASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 AC069148.1-201ENST00000608741 768 ntBASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 AC092119.3-201ENST00000612618 583 ntBASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 NPAP1P7-201ENST00000613027 823 ntBASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 GGTLC5P-201ENST00000617623 998 ntBASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 AL390755.1-201ENST00000623716 2027 ntBASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 PPP1R26P4-201ENST00000619065 3527 ntBASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC10.66□□□□□ -0.7
SND1-IT1Q9HBX3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 AC105250.1-201ENST00000509378 2057 ntBASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
SND1-IT1Q9HBX3 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms