Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 FAM8A3P-201ENST00000427218 844 ntBASIC11.87□□□□□ -0.51
NUP35Q8NFH5 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 RBSN-204ENST00000449050 903 ntTSL 2 BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 AC092647.4-201ENST00000457211 535 ntBASIC11.87□□□□□ -0.51
NUP35Q8NFH5 BX005266.1-201ENST00000473402 457 ntBASIC11.87□□□□□ -0.51
NUP35Q8NFH5 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 NTF6B-201ENST00000591913 560 ntBASIC11.87□□□□□ -0.51
NUP35Q8NFH5 GZMM-202ENST00000592501 941 ntTSL 3 BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 Z69720.1-201ENST00000601483 472 ntBASIC11.87□□□□□ -0.51
NUP35Q8NFH5 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 AL365330.1-201ENST00000607459 531 ntBASIC11.87□□□□□ -0.51
NUP35Q8NFH5 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 TKT-201ENST00000296289 1931 ntTSL 5 BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 AC233702.3-201ENST00000578656 1387 ntBASIC11.87□□□□□ -0.51
NUP35Q8NFH5 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NUP35Q8NFH5 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 NDUFV2-AS1-203ENST00000608008 779 ntBASIC11.86□□□□□ -0.51
NUP35Q8NFH5 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
NUP35Q8NFH5 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms