Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
FOXR1Q6PIV2 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 LINC00982-205ENST00000420957 435 ntBASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 AC074386.1-202ENST00000463561 864 ntBASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 AC096734.2-201ENST00000562054 433 ntBASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 AC027612.4-201ENST00000605371 583 ntBASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 GGTLC5P-201ENST00000617623 998 ntBASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 AC007064.4-201ENST00000637740 555 ntBASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
FOXR1Q6PIV2 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FOXR1Q6PIV2 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
FOXR1Q6PIV2 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
FOXR1Q6PIV2 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.58■□□□□ 0.25
FOXR1Q6PIV2 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
FOXR1Q6PIV2 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXR1Q6PIV2 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
FOXR1Q6PIV2 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FOXR1Q6PIV2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.58■□□□□ 0.24
FOXR1Q6PIV2 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
FOXR1Q6PIV2 MYCLP1-201ENST00000372451 1075 ntBASIC16.58■□□□□ 0.24
FOXR1Q6PIV2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.58■□□□□ 0.24
FOXR1Q6PIV2 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FOXR1Q6PIV2 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.58■□□□□ 0.24
FOXR1Q6PIV2 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXR1Q6PIV2 STK25P1-201ENST00000585406 838 ntBASIC16.58■□□□□ 0.24
FOXR1Q6PIV2 AC023141.13-201ENST00000604991 943 ntBASIC16.58■□□□□ 0.24
FOXR1Q6PIV2 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXR1Q6PIV2 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.58■□□□□ 0.24
FOXR1Q6PIV2 AL135999.2-201ENST00000622438 1686 ntBASIC16.58■□□□□ 0.24
FOXR1Q6PIV2 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXR1Q6PIV2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.58■□□□□ 0.24
FOXR1Q6PIV2 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FOXR1Q6PIV2 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
FOXR1Q6PIV2 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
FOXR1Q6PIV2 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXR1Q6PIV2 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.58■□□□□ 0.24
FOXR1Q6PIV2 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
FOXR1Q6PIV2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
FOXR1Q6PIV2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms