Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.11□□□□□ -0.15
PCGF3Q3KNV8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCGF3Q3KNV8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCGF3Q3KNV8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCGF3Q3KNV8 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PCGF3Q3KNV8 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PCGF3Q3KNV8 KRT18P28-201ENST00000453838 1332 ntBASIC14.11□□□□□ -0.15
PCGF3Q3KNV8 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PCGF3Q3KNV8 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PCGF3Q3KNV8 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PCGF3Q3KNV8 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 AC016027.1-202ENST00000607927 1699 ntBASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 AC136621.1-201ENST00000624017 2304 ntBASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 LINC01144-201ENST00000626198 1710 ntBASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 AC023141.5-201ENST00000458585 616 ntBASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 KRT8P48-201ENST00000515599 1220 ntBASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 AC243562.1-201ENST00000560672 389 ntBASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 AC008267.7-201ENST00000624570 1194 ntBASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 AC006486.2-201ENST00000624246 2199 ntBASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PCGF3Q3KNV8 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 MIR648-201ENST00000385046 94 ntBASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 AL627223.1-201ENST00000416693 442 ntBASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 AC020765.3-201ENST00000613051 740 ntBASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.09□□□□□ -0.15
PCGF3Q3KNV8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms