Protein–RNA interactions for Protein: Q05086

UBE3A, Ubiquitin-protein ligase E3A, humanhuman

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3AQ05086 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
UBE3AQ05086 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.65■□□□□ 0.26
UBE3AQ05086 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
UBE3AQ05086 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE3AQ05086 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBE3AQ05086 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBE3AQ05086 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE3AQ05086 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.65■□□□□ 0.26
UBE3AQ05086 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
UBE3AQ05086 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.65■□□□□ 0.26
UBE3AQ05086 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE3AQ05086 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE3AQ05086 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.65■□□□□ 0.26
UBE3AQ05086 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE3AQ05086 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE3AQ05086 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
UBE3AQ05086 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
UBE3AQ05086 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.65■□□□□ 0.26
UBE3AQ05086 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE3AQ05086 CALR4P-201ENST00000431943 946 ntBASIC16.65■□□□□ 0.26
UBE3AQ05086 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.65■□□□□ 0.26
UBE3AQ05086 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.65■□□□□ 0.26
UBE3AQ05086 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.65■□□□□ 0.26
UBE3AQ05086 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.65■□□□□ 0.26
UBE3AQ05086 AP001094.4-201ENST00000579008 2176 ntBASIC16.65■□□□□ 0.26
UBE3AQ05086 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
UBE3AQ05086 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE3AQ05086 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UBE3AQ05086 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.65■□□□□ 0.26
UBE3AQ05086 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UBE3AQ05086 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
UBE3AQ05086 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.64■□□□□ 0.26
UBE3AQ05086 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
UBE3AQ05086 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
UBE3AQ05086 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.64■□□□□ 0.26
UBE3AQ05086 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.64■□□□□ 0.25
UBE3AQ05086 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE3AQ05086 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
UBE3AQ05086 AC008894.3-201ENST00000624324 3103 ntBASIC16.64■□□□□ 0.25
UBE3AQ05086 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
UBE3AQ05086 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
UBE3AQ05086 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE3AQ05086 RNF216P1-203ENST00000404404 2427 ntBASIC16.64■□□□□ 0.25
UBE3AQ05086 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBE3AQ05086 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
UBE3AQ05086 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE3AQ05086 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.64■□□□□ 0.25
UBE3AQ05086 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE3AQ05086 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE3AQ05086 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE3AQ05086 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE3AQ05086 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
UBE3AQ05086 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE3AQ05086 AC092506.1-202ENST00000401022 528 ntBASIC16.64■□□□□ 0.25
UBE3AQ05086 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE3AQ05086 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.64■□□□□ 0.25
UBE3AQ05086 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.64■□□□□ 0.25
UBE3AQ05086 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.64■□□□□ 0.25
UBE3AQ05086 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE3AQ05086 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.64■□□□□ 0.25
UBE3AQ05086 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.64■□□□□ 0.25
UBE3AQ05086 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.64■□□□□ 0.25
UBE3AQ05086 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
UBE3AQ05086 AC138951.2-201ENST00000623455 1161 ntBASIC16.64■□□□□ 0.25
UBE3AQ05086 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.64■□□□□ 0.25
UBE3AQ05086 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.64■□□□□ 0.25
UBE3AQ05086 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE3AQ05086 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
UBE3AQ05086 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.64■□□□□ 0.25
UBE3AQ05086 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE3AQ05086 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE3AQ05086 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UBE3AQ05086 AHCYP2-201ENST00000430630 1300 ntBASIC16.64■□□□□ 0.25
UBE3AQ05086 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UBE3AQ05086 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
UBE3AQ05086 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
UBE3AQ05086 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.63■□□□□ 0.25
UBE3AQ05086 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.63■□□□□ 0.25
UBE3AQ05086 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.63■□□□□ 0.25
UBE3AQ05086 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.63■□□□□ 0.25
UBE3AQ05086 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.63■□□□□ 0.25
UBE3AQ05086 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
UBE3AQ05086 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.63■□□□□ 0.25
UBE3AQ05086 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
UBE3AQ05086 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UBE3AQ05086 BTBD6P1-201ENST00000412176 1267 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms