Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD47Q08722 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CD47Q08722 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD47Q08722 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
CD47Q08722 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD47Q08722 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD47Q08722 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
CD47Q08722 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD47Q08722 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD47Q08722 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CD47Q08722 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.78□□□□□ -0.04
CD47Q08722 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
CD47Q08722 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD47Q08722 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.78□□□□□ -0.04
CD47Q08722 AC079776.4-201ENST00000511039 504 ntBASIC14.78□□□□□ -0.04
CD47Q08722 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.78□□□□□ -0.04
CD47Q08722 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD47Q08722 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.78□□□□□ -0.04
CD47Q08722 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.78□□□□□ -0.04
CD47Q08722 AC009090.5-201ENST00000624886 2285 ntBASIC14.78□□□□□ -0.04
CD47Q08722 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD47Q08722 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD47Q08722 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.78□□□□□ -0.04
CD47Q08722 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD47Q08722 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.78□□□□□ -0.04
CD47Q08722 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD47Q08722 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD47Q08722 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
CD47Q08722 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.78□□□□□ -0.04
CD47Q08722 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.77□□□□□ -0.04
CD47Q08722 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.77□□□□□ -0.04
CD47Q08722 FGD5P1-202ENST00000614866 2498 ntBASIC14.77□□□□□ -0.04
CD47Q08722 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.77□□□□□ -0.04
CD47Q08722 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD47Q08722 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD47Q08722 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD47Q08722 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
CD47Q08722 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD47Q08722 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CD47Q08722 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.77□□□□□ -0.04
CD47Q08722 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD47Q08722 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD47Q08722 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD47Q08722 HLA-A-201ENST00000376802 1334 ntBASIC14.77□□□□□ -0.04
CD47Q08722 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD47Q08722 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
CD47Q08722 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
CD47Q08722 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CD47Q08722 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD47Q08722 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
CD47Q08722 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD47Q08722 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.77□□□□□ -0.05
CD47Q08722 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CD47Q08722 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.77□□□□□ -0.05
CD47Q08722 IGHV3-22-201ENST00000520721 359 ntBASIC14.77□□□□□ -0.05
CD47Q08722 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.77□□□□□ -0.05
CD47Q08722 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.77□□□□□ -0.05
CD47Q08722 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.77□□□□□ -0.05
CD47Q08722 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD47Q08722 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.77□□□□□ -0.05
CD47Q08722 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD47Q08722 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD47Q08722 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD47Q08722 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD47Q08722 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD47Q08722 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD47Q08722 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD47Q08722 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD47Q08722 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
CD47Q08722 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
CD47Q08722 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.77□□□□□ -0.05
CD47Q08722 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.77□□□□□ -0.05
CD47Q08722 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CD47Q08722 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD47Q08722 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.77□□□□□ -0.05
CD47Q08722 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CD47Q08722 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.77□□□□□ -0.05
CD47Q08722 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD47Q08722 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.76□□□□□ -0.05
CD47Q08722 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD47Q08722 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD47Q08722 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD47Q08722 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD47Q08722 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD47Q08722 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
CD47Q08722 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD47Q08722 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CD47Q08722 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD47Q08722 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.76□□□□□ -0.05
CD47Q08722 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD47Q08722 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.76□□□□□ -0.05
CD47Q08722 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD47Q08722 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD47Q08722 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD47Q08722 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CD47Q08722 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.76□□□□□ -0.05
CD47Q08722 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CD47Q08722 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.76□□□□□ -0.05
CD47Q08722 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.76□□□□□ -0.05
CD47Q08722 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms