Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC20.7■□□□□ 0.9
COL16A1Q07092 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC20.7■□□□□ 0.9
COL16A1Q07092 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC20.7■□□□□ 0.9
COL16A1Q07092 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC20.7■□□□□ 0.9
COL16A1Q07092 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL16A1Q07092 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
COL16A1Q07092 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
COL16A1Q07092 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL16A1Q07092 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL16A1Q07092 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
COL16A1Q07092 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC20.69■□□□□ 0.9
COL16A1Q07092 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL16A1Q07092 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC20.69■□□□□ 0.9
COL16A1Q07092 AC078875.1-201ENST00000431907 724 ntBASIC20.69■□□□□ 0.9
COL16A1Q07092 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
COL16A1Q07092 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC20.69■□□□□ 0.9
COL16A1Q07092 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC20.69■□□□□ 0.9
COL16A1Q07092 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
COL16A1Q07092 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
COL16A1Q07092 MIR4522-201ENST00000584932 87 ntBASIC20.69■□□□□ 0.9
COL16A1Q07092 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC20.69■□□□□ 0.9
COL16A1Q07092 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC20.69■□□□□ 0.9
COL16A1Q07092 MBLAC2-202ENST00000514906 1936 ntBASIC20.69■□□□□ 0.9
COL16A1Q07092 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL16A1Q07092 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC20.69■□□□□ 0.9
COL16A1Q07092 AL008718.2-201ENST00000609206 1313 ntBASIC20.69■□□□□ 0.9
COL16A1Q07092 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL16A1Q07092 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.69■□□□□ 0.9
COL16A1Q07092 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
COL16A1Q07092 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL16A1Q07092 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL16A1Q07092 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
COL16A1Q07092 AC055811.4-201ENST00000624039 1754 ntBASIC20.68■□□□□ 0.9
COL16A1Q07092 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL16A1Q07092 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC20.68■□□□□ 0.9
COL16A1Q07092 AC004066.1-201ENST00000502488 802 ntBASIC20.68■□□□□ 0.9
COL16A1Q07092 SCARNA21-201ENST00000517026 139 ntBASIC20.68■□□□□ 0.9
COL16A1Q07092 EHF-205ENST00000527935 557 ntTSL 2 BASIC20.68■□□□□ 0.9
COL16A1Q07092 AC027237.1-201ENST00000560942 655 ntBASIC20.68■□□□□ 0.9
COL16A1Q07092 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
COL16A1Q07092 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC20.68■□□□□ 0.9
COL16A1Q07092 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
COL16A1Q07092 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL16A1Q07092 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC20.68■□□□□ 0.9
COL16A1Q07092 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL16A1Q07092 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
COL16A1Q07092 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC20.68■□□□□ 0.9
COL16A1Q07092 NHP2-202ENST00000314397 599 ntTSL 2 BASIC20.67■□□□□ 0.9
COL16A1Q07092 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL16A1Q07092 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL16A1Q07092 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL16A1Q07092 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC20.67■□□□□ 0.9
COL16A1Q07092 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL16A1Q07092 POU5F1P2-201ENST00000521750 823 ntBASIC20.67■□□□□ 0.9
COL16A1Q07092 Z98259.2-201ENST00000641583 609 ntBASIC20.67■□□□□ 0.9
COL16A1Q07092 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.67■□□□□ 0.9
COL16A1Q07092 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL16A1Q07092 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
COL16A1Q07092 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL16A1Q07092 HCG27-204ENST00000424675 895 ntTSL 3 BASIC20.67■□□□□ 0.9
COL16A1Q07092 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC20.67■□□□□ 0.9
COL16A1Q07092 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
COL16A1Q07092 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC20.67■□□□□ 0.9
COL16A1Q07092 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC20.67■□□□□ 0.9
COL16A1Q07092 AC107464.3-201ENST00000609172 737 ntBASIC20.67■□□□□ 0.9
COL16A1Q07092 AC084781.1-201ENST00000613737 656 ntBASIC20.67■□□□□ 0.9
COL16A1Q07092 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.67■□□□□ 0.9
COL16A1Q07092 CMC2-224ENST00000630396 481 ntTSL 5 BASIC20.67■□□□□ 0.9
COL16A1Q07092 AC002472.3-201ENST00000640124 621 ntBASIC20.67■□□□□ 0.9
COL16A1Q07092 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL16A1Q07092 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL16A1Q07092 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
COL16A1Q07092 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC20.66■□□□□ 0.9
COL16A1Q07092 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
COL16A1Q07092 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL16A1Q07092 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.66■□□□□ 0.9
COL16A1Q07092 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL16A1Q07092 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC20.66■□□□□ 0.9
COL16A1Q07092 FLII-221ENST00000578558 2377 ntTSL 5 BASIC20.66■□□□□ 0.9
COL16A1Q07092 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
COL16A1Q07092 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL16A1Q07092 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC20.66■□□□□ 0.9
COL16A1Q07092 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC20.66■□□□□ 0.9
COL16A1Q07092 CHCHD2P9-201ENST00000461726 456 ntBASIC20.66■□□□□ 0.9
COL16A1Q07092 POLD4-208ENST00000532830 904 ntTSL 3 BASIC20.66■□□□□ 0.9
COL16A1Q07092 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC20.66■□□□□ 0.9
COL16A1Q07092 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC20.66■□□□□ 0.9
COL16A1Q07092 AC018695.6-201ENST00000614011 534 ntBASIC20.66■□□□□ 0.9
COL16A1Q07092 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC20.66■□□□□ 0.9
COL16A1Q07092 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL16A1Q07092 NOC2LP2-201ENST00000407594 1944 ntBASIC20.66■□□□□ 0.9
COL16A1Q07092 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
COL16A1Q07092 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL16A1Q07092 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.66■□□□□ 0.9
COL16A1Q07092 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL16A1Q07092 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL16A1Q07092 UBALD1-205ENST00000590891 2641 ntBASIC20.66■□□□□ 0.9
COL16A1Q07092 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
COL16A1Q07092 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
COL16A1Q07092 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms