Protein–RNA interactions for Protein: P55084

HADHB, Trifunctional enzyme subunit beta, mitochondrial, humanhuman

Known RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHBP55084 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.53■□□□□ 0.24
HADHBP55084 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HADHBP55084 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HADHBP55084 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HADHBP55084 TARDBPP1-201ENST00000442013 1203 ntBASIC16.53■□□□□ 0.24
HADHBP55084 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.53■□□□□ 0.24
HADHBP55084 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.53■□□□□ 0.24
HADHBP55084 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.53■□□□□ 0.24
HADHBP55084 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.53■□□□□ 0.24
HADHBP55084 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.53■□□□□ 0.24
HADHBP55084 AC093520.2-201ENST00000561830 333 ntBASIC16.53■□□□□ 0.24
HADHBP55084 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
HADHBP55084 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.53■□□□□ 0.24
HADHBP55084 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
HADHBP55084 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.53■□□□□ 0.24
HADHBP55084 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
HADHBP55084 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.53■□□□□ 0.24
HADHBP55084 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.53■□□□□ 0.24
HADHBP55084 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
HADHBP55084 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.53■□□□□ 0.24
HADHBP55084 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HADHBP55084 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HADHBP55084 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
HADHBP55084 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HADHBP55084 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.53■□□□□ 0.24
HADHBP55084 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HADHBP55084 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HADHBP55084 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HADHBP55084 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
HADHBP55084 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HADHBP55084 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
HADHBP55084 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HADHBP55084 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HADHBP55084 AL035456.1-201ENST00000456064 1369 ntBASIC16.52■□□□□ 0.24
HADHBP55084 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HADHBP55084 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.52■□□□□ 0.24
HADHBP55084 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HADHBP55084 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
HADHBP55084 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HADHBP55084 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.52■□□□□ 0.24
HADHBP55084 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HADHBP55084 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HADHBP55084 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.52■□□□□ 0.24
HADHBP55084 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
HADHBP55084 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HADHBP55084 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.52■□□□□ 0.24
HADHBP55084 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HADHBP55084 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.24
HADHBP55084 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HADHBP55084 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HADHBP55084 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
HADHBP55084 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
HADHBP55084 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.52■□□□□ 0.24
HADHBP55084 AL627223.1-201ENST00000416693 442 ntBASIC16.52■□□□□ 0.24
HADHBP55084 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.52■□□□□ 0.24
HADHBP55084 FAM8A3P-201ENST00000427218 844 ntBASIC16.52■□□□□ 0.24
HADHBP55084 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.52■□□□□ 0.24
HADHBP55084 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.52■□□□□ 0.24
HADHBP55084 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.52■□□□□ 0.24
HADHBP55084 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.52■□□□□ 0.24
HADHBP55084 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HADHBP55084 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.52■□□□□ 0.24
HADHBP55084 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.52■□□□□ 0.24
HADHBP55084 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
HADHBP55084 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HADHBP55084 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
HADHBP55084 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.52■□□□□ 0.24
HADHBP55084 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
HADHBP55084 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.52■□□□□ 0.23
HADHBP55084 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
HADHBP55084 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HADHBP55084 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HADHBP55084 LINC02228-204ENST00000642115 2962 ntBASIC16.52■□□□□ 0.23
HADHBP55084 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
HADHBP55084 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
HADHBP55084 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.52■□□□□ 0.23
HADHBP55084 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HADHBP55084 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.51■□□□□ 0.23
HADHBP55084 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHBP55084 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHBP55084 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HADHBP55084 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
HADHBP55084 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.51■□□□□ 0.23
HADHBP55084 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HADHBP55084 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.51■□□□□ 0.23
HADHBP55084 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HADHBP55084 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.51■□□□□ 0.23
HADHBP55084 MIR940-201ENST00000401276 94 ntBASIC16.51■□□□□ 0.23
HADHBP55084 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HADHBP55084 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.51■□□□□ 0.23
HADHBP55084 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.51■□□□□ 0.23
HADHBP55084 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.51■□□□□ 0.23
HADHBP55084 KRT18P32-201ENST00000424695 1287 ntBASIC16.51■□□□□ 0.23
HADHBP55084 GHSR-202ENST00000427970 912 ntBASIC16.51■□□□□ 0.23
HADHBP55084 AC005237.2-201ENST00000434368 219 ntBASIC16.51■□□□□ 0.23
HADHBP55084 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.51■□□□□ 0.23
HADHBP55084 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.51■□□□□ 0.23
HADHBP55084 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.51■□□□□ 0.23
HADHBP55084 AC005829.1-201ENST00000570002 483 ntBASIC16.51■□□□□ 0.23
HADHBP55084 AC011467.4-201ENST00000594891 528 ntBASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms