Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BMP4P12644 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
BMP4P12644 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BMP4P12644 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
BMP4P12644 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BMP4P12644 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BMP4P12644 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
BMP4P12644 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
BMP4P12644 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
BMP4P12644 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.63□□□□□ -0.07
BMP4P12644 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.63□□□□□ -0.07
BMP4P12644 HTR5BP-201ENST00000430851 1154 ntBASIC14.63□□□□□ -0.07
BMP4P12644 AP006288.1-201ENST00000446065 395 ntBASIC14.63□□□□□ -0.07
BMP4P12644 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC14.63□□□□□ -0.07
BMP4P12644 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.63□□□□□ -0.07
BMP4P12644 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BMP4P12644 AC018845.2-201ENST00000568326 409 ntBASIC14.63□□□□□ -0.07
BMP4P12644 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.63□□□□□ -0.07
BMP4P12644 AL513190.1-201ENST00000621254 727 ntBASIC14.63□□□□□ -0.07
BMP4P12644 AC055717.3-201ENST00000622967 595 ntBASIC14.63□□□□□ -0.07
BMP4P12644 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.63□□□□□ -0.07
BMP4P12644 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BMP4P12644 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.63□□□□□ -0.07
BMP4P12644 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.63□□□□□ -0.07
BMP4P12644 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
BMP4P12644 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BMP4P12644 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
BMP4P12644 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.63□□□□□ -0.07
BMP4P12644 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.63□□□□□ -0.07
BMP4P12644 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BMP4P12644 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
BMP4P12644 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
BMP4P12644 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BMP4P12644 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BMP4P12644 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BMP4P12644 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BMP4P12644 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BMP4P12644 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BMP4P12644 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BMP4P12644 AC067930.6-201ENST00000623257 4947 ntBASIC14.62□□□□□ -0.07
BMP4P12644 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
BMP4P12644 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BMP4P12644 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.62□□□□□ -0.07
BMP4P12644 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BMP4P12644 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.62□□□□□ -0.07
BMP4P12644 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
BMP4P12644 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BMP4P12644 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
BMP4P12644 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
BMP4P12644 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BMP4P12644 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.62□□□□□ -0.07
BMP4P12644 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.62□□□□□ -0.07
BMP4P12644 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BMP4P12644 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BMP4P12644 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BMP4P12644 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BMP4P12644 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BMP4P12644 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
BMP4P12644 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
BMP4P12644 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BMP4P12644 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
BMP4P12644 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
BMP4P12644 AC254562.1-201ENST00000417586 456 ntBASIC14.62□□□□□ -0.07
BMP4P12644 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
BMP4P12644 RHOQP3-201ENST00000437982 621 ntBASIC14.62□□□□□ -0.07
BMP4P12644 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
BMP4P12644 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BMP4P12644 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.62□□□□□ -0.07
BMP4P12644 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BMP4P12644 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.62□□□□□ -0.07
BMP4P12644 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
BMP4P12644 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BMP4P12644 AC092919.2-201ENST00000623631 1645 ntBASIC14.62□□□□□ -0.07
BMP4P12644 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BMP4P12644 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BMP4P12644 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
BMP4P12644 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BMP4P12644 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
BMP4P12644 AC013726.1-201ENST00000563747 2285 ntBASIC14.62□□□□□ -0.07
BMP4P12644 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
BMP4P12644 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.62□□□□□ -0.07
BMP4P12644 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
BMP4P12644 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BMP4P12644 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.62□□□□□ -0.07
BMP4P12644 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
BMP4P12644 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BMP4P12644 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.61□□□□□ -0.07
BMP4P12644 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BMP4P12644 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BMP4P12644 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BMP4P12644 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
BMP4P12644 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.61□□□□□ -0.07
BMP4P12644 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BMP4P12644 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
BMP4P12644 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
BMP4P12644 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
BMP4P12644 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
BMP4P12644 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC14.61□□□□□ -0.07
BMP4P12644 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
BMP4P12644 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms