Protein–RNA interactions for Protein: O95273

CCNDBP1, Cyclin-D1-binding protein 1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1O95273 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCNDBP1O95273 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCNDBP1O95273 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.44■□□□□ 0.06
CCNDBP1O95273 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.44■□□□□ 0.06
CCNDBP1O95273 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CCNDBP1O95273 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.44■□□□□ 0.06
CCNDBP1O95273 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CCNDBP1O95273 AC144831.1-201ENST00000573312 2656 ntBASIC15.44■□□□□ 0.06
CCNDBP1O95273 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCNDBP1O95273 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CCNDBP1O95273 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.44■□□□□ 0.06
CCNDBP1O95273 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCNDBP1O95273 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCNDBP1O95273 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCNDBP1O95273 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCNDBP1O95273 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCNDBP1O95273 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCNDBP1O95273 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCNDBP1O95273 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCNDBP1O95273 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCNDBP1O95273 MIR943-201ENST00000401286 94 ntBASIC15.44■□□□□ 0.06
CCNDBP1O95273 FO393414.2-201ENST00000405153 598 ntBASIC15.44■□□□□ 0.06
CCNDBP1O95273 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCNDBP1O95273 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.44■□□□□ 0.06
CCNDBP1O95273 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC15.44■□□□□ 0.06
CCNDBP1O95273 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.44■□□□□ 0.06
CCNDBP1O95273 IGHV3-42-201ENST00000520410 361 ntBASIC15.44■□□□□ 0.06
CCNDBP1O95273 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.44■□□□□ 0.06
CCNDBP1O95273 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCNDBP1O95273 RFPL4AP1-201ENST00000530883 850 ntBASIC15.44■□□□□ 0.06
CCNDBP1O95273 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.44■□□□□ 0.06
CCNDBP1O95273 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.44■□□□□ 0.06
CCNDBP1O95273 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCNDBP1O95273 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.44■□□□□ 0.06
CCNDBP1O95273 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCNDBP1O95273 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCNDBP1O95273 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CCNDBP1O95273 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCNDBP1O95273 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC15.44■□□□□ 0.06
CCNDBP1O95273 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CCNDBP1O95273 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CCNDBP1O95273 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.44■□□□□ 0.06
CCNDBP1O95273 BNIP3P1-202ENST00000550043 1585 ntBASIC15.44■□□□□ 0.06
CCNDBP1O95273 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.44■□□□□ 0.06
CCNDBP1O95273 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCNDBP1O95273 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CCNDBP1O95273 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCNDBP1O95273 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCNDBP1O95273 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.44■□□□□ 0.06
CCNDBP1O95273 AC073347.1-201ENST00000421633 2643 ntBASIC15.44■□□□□ 0.06
CCNDBP1O95273 AC134407.2-201ENST00000625089 1978 ntBASIC15.44■□□□□ 0.06
CCNDBP1O95273 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CCNDBP1O95273 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CCNDBP1O95273 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCNDBP1O95273 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.43■□□□□ 0.06
CCNDBP1O95273 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCNDBP1O95273 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.43■□□□□ 0.06
CCNDBP1O95273 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCNDBP1O95273 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCNDBP1O95273 DBET-201ENST00000630918 3363 ntBASIC15.43■□□□□ 0.06
CCNDBP1O95273 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.43■□□□□ 0.06
CCNDBP1O95273 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCNDBP1O95273 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCNDBP1O95273 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCNDBP1O95273 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCNDBP1O95273 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.43■□□□□ 0.06
CCNDBP1O95273 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCNDBP1O95273 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.43■□□□□ 0.06
CCNDBP1O95273 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.43■□□□□ 0.06
CCNDBP1O95273 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.43■□□□□ 0.06
CCNDBP1O95273 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.43■□□□□ 0.06
CCNDBP1O95273 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.43■□□□□ 0.06
CCNDBP1O95273 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.43■□□□□ 0.06
CCNDBP1O95273 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.43■□□□□ 0.06
CCNDBP1O95273 AC093512.1-201ENST00000617969 520 ntBASIC15.43■□□□□ 0.06
CCNDBP1O95273 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.43■□□□□ 0.06
CCNDBP1O95273 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CCNDBP1O95273 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCNDBP1O95273 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.43■□□□□ 0.06
CCNDBP1O95273 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CCNDBP1O95273 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.43■□□□□ 0.06
CCNDBP1O95273 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCNDBP1O95273 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCNDBP1O95273 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CCNDBP1O95273 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CCNDBP1O95273 PRAL-201ENST00000624952 3286 ntBASIC15.43■□□□□ 0.06
CCNDBP1O95273 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CCNDBP1O95273 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.43■□□□□ 0.06
CCNDBP1O95273 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CCNDBP1O95273 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CCNDBP1O95273 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCNDBP1O95273 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.42■□□□□ 0.06
CCNDBP1O95273 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CCNDBP1O95273 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCNDBP1O95273 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCNDBP1O95273 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.42■□□□□ 0.06
CCNDBP1O95273 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCNDBP1O95273 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
CCNDBP1O95273 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CCNDBP1O95273 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms