Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 AC114501.2-201ENST00000439631 535 ntBASIC11.3□□□□□ -0.6
LYRM9A8MSI8 USP40-206ENST00000443711 628 ntTSL 2 BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 SLED1-202ENST00000512051 380 ntBASIC11.3□□□□□ -0.6
LYRM9A8MSI8 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 STOM-203ENST00000538954 1257 ntTSL 5 BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 AC044860.1-202ENST00000559481 777 ntBASIC11.3□□□□□ -0.6
LYRM9A8MSI8 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 AL109936.8-201ENST00000641772 604 ntBASIC11.3□□□□□ -0.6
LYRM9A8MSI8 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 LOX-206ENST00000639739 1626 ntTSL 5 BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
LYRM9A8MSI8 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 AP005117.1-202ENST00000581724 1908 ntBASIC11.29□□□□□ -0.6
LYRM9A8MSI8 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC11.29□□□□□ -0.6
LYRM9A8MSI8 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 TARDBPP1-201ENST00000442013 1203 ntBASIC11.29□□□□□ -0.6
LYRM9A8MSI8 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 FAM207CP-201ENST00000443486 507 ntBASIC11.29□□□□□ -0.6
LYRM9A8MSI8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 REEP4-207ENST00000523293 913 ntTSL 3 BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 AC135586.1-201ENST00000539323 574 ntBASIC11.29□□□□□ -0.6
LYRM9A8MSI8 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 SPCS2P1-201ENST00000561636 679 ntBASIC11.29□□□□□ -0.6
LYRM9A8MSI8 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 AC097359.3-201ENST00000603982 1210 ntBASIC11.29□□□□□ -0.6
LYRM9A8MSI8 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
LYRM9A8MSI8 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms