Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
SND1-IT1Q9HBX3 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 AC107918.2-201ENST00000530817 355 ntBASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 WT1-AS_2.1-201ENST00000613208 137 ntBASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 BCL10-202ENST00000620248 774 ntTSL 5 BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 HADH-212ENST00000638621 741 ntTSL 5 BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 AL805961.1-202ENST00000641562 540 ntBASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 AC008677.1-201ENST00000519230 1561 ntBASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
SND1-IT1Q9HBX3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 PARN-202ENST00000420015 2360 ntTSL 2 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 AC013726.1-201ENST00000563747 2285 ntBASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 AC129492.6-201ENST00000611383 1305 ntBASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 MARS-233ENST00000628866 2583 ntTSL 5 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 ARMC10P1-201ENST00000313754 855 ntBASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms