Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 AC093214.1-201ENST00000511688 1107 ntBASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 ZNF890P-202ENST00000530367 1156 ntBASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 AC005498.2-205ENST00000593218 784 ntBASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 AL844908.2-201ENST00000609461 460 ntBASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC148Q8NFR7 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 TSSK5P-201ENST00000423978 907 ntBASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 DUT-210ENST00000559935 569 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 AC025048.3-201ENST00000590609 569 ntBASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 AC097359.3-201ENST00000603982 1210 ntBASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 AC005702.4-201ENST00000618393 416 ntBASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC148Q8NFR7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC148Q8NFR7 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.51
CCDC148Q8NFR7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC148Q8NFR7 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
CCDC148Q8NFR7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC148Q8NFR7 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC148Q8NFR7 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.27■□□□□ 0.51
CCDC148Q8NFR7 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC148Q8NFR7 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC148Q8NFR7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC148Q8NFR7 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC148Q8NFR7 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC148Q8NFR7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC148Q8NFR7 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC148Q8NFR7 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC148Q8NFR7 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC148Q8NFR7 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CCDC148Q8NFR7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC148Q8NFR7 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC148Q8NFR7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC148Q8NFR7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC148Q8NFR7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC148Q8NFR7 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC148Q8NFR7 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC148Q8NFR7 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC148Q8NFR7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC148Q8NFR7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC148Q8NFR7 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CCDC148Q8NFR7 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CCDC148Q8NFR7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC148Q8NFR7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC148Q8NFR7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC148Q8NFR7 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 406.6 ms