Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 IGHV3-42-201ENST00000520410 361 ntBASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 AL390754.1-201ENST00000619088 582 ntBASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
BLOC1S4Q9NUP1 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BLOC1S4Q9NUP1 LINC00554-201ENST00000564841 3011 ntBASIC17.58■□□□□ 0.41
BLOC1S4Q9NUP1 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BLOC1S4Q9NUP1 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.58■□□□□ 0.41
BLOC1S4Q9NUP1 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
BLOC1S4Q9NUP1 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BLOC1S4Q9NUP1 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
BLOC1S4Q9NUP1 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BLOC1S4Q9NUP1 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 SDHAP3-202ENST00000515467 728 ntBASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 AC074044.1-201ENST00000609673 707 ntBASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BLOC1S4Q9NUP1 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC17.57■□□□□ 0.4
BLOC1S4Q9NUP1 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
BLOC1S4Q9NUP1 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BLOC1S4Q9NUP1 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.57■□□□□ 0.4
BLOC1S4Q9NUP1 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BLOC1S4Q9NUP1 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BLOC1S4Q9NUP1 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BLOC1S4Q9NUP1 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BLOC1S4Q9NUP1 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.57■□□□□ 0.4
BLOC1S4Q9NUP1 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
BLOC1S4Q9NUP1 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BLOC1S4Q9NUP1 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BLOC1S4Q9NUP1 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.57■□□□□ 0.4
BLOC1S4Q9NUP1 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.57■□□□□ 0.4
BLOC1S4Q9NUP1 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.57■□□□□ 0.4
BLOC1S4Q9NUP1 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.57■□□□□ 0.4
BLOC1S4Q9NUP1 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BLOC1S4Q9NUP1 SLED1-202ENST00000512051 380 ntBASIC17.57■□□□□ 0.4
BLOC1S4Q9NUP1 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
BLOC1S4Q9NUP1 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.57■□□□□ 0.4
BLOC1S4Q9NUP1 ORC5-208ENST00000626700 344 ntTSL 3 BASIC17.57■□□□□ 0.4
BLOC1S4Q9NUP1 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC17.57■□□□□ 0.4
BLOC1S4Q9NUP1 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BLOC1S4Q9NUP1 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.57■□□□□ 0.4
BLOC1S4Q9NUP1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.57■□□□□ 0.4
BLOC1S4Q9NUP1 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
BLOC1S4Q9NUP1 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms