Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 AC138894.3-201ENST00000603787 634 ntBASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRDV1A0A1B0GX56 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 CICP14-201ENST00000629111 2732 ntBASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 AC005840.4-201ENST00000541242 2494 ntBASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 AC018892.3-201ENST00000623986 2499 ntBASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 FGFR3P6-201ENST00000457012 610 ntBASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 AC002347.1-201ENST00000569543 541 ntBASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 ACTL9-202ENST00000612068 1252 ntBASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
TRDV1A0A1B0GX56 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRDV1A0A1B0GX56 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRDV1A0A1B0GX56 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
TRDV1A0A1B0GX56 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRDV1A0A1B0GX56 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRDV1A0A1B0GX56 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRDV1A0A1B0GX56 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
TRDV1A0A1B0GX56 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRDV1A0A1B0GX56 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRDV1A0A1B0GX56 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRDV1A0A1B0GX56 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRDV1A0A1B0GX56 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms