Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SH3KBP1Q96B97 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SH3KBP1Q96B97 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.82■□□□□ 0.12
SH3KBP1Q96B97 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SH3KBP1Q96B97 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.82■□□□□ 0.12
SH3KBP1Q96B97 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.82■□□□□ 0.12
SH3KBP1Q96B97 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
SH3KBP1Q96B97 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
SH3KBP1Q96B97 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.82■□□□□ 0.12
SH3KBP1Q96B97 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SH3KBP1Q96B97 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 AC138761.1-201ENST00000584393 385 ntBASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SH3KBP1Q96B97 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 AC007950.2-201ENST00000615045 2347 ntBASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 AL592424.1-201ENST00000563624 1536 ntBASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 AC004890.2-204ENST00000481968 304 ntBASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 AC061975.2-201ENST00000581722 295 ntBASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SH3KBP1Q96B97 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms