Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
HPS1Q92902 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HPS1Q92902 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HPS1Q92902 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.69□□□□□ -0.06
HPS1Q92902 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HPS1Q92902 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HPS1Q92902 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
HPS1Q92902 CICP23-201ENST00000605013 2741 ntBASIC14.69□□□□□ -0.06
HPS1Q92902 LRTM1-201ENST00000273286 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HPS1Q92902 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
HPS1Q92902 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HPS1Q92902 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
HPS1Q92902 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HPS1Q92902 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HPS1Q92902 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.69□□□□□ -0.06
HPS1Q92902 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
HPS1Q92902 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
HPS1Q92902 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HPS1Q92902 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.69□□□□□ -0.06
HPS1Q92902 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC14.69□□□□□ -0.06
HPS1Q92902 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC14.69□□□□□ -0.06
HPS1Q92902 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.69□□□□□ -0.06
HPS1Q92902 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC14.69□□□□□ -0.06
HPS1Q92902 AC006518.1-201ENST00000541449 943 ntBASIC14.69□□□□□ -0.06
HPS1Q92902 AC012640.2-201ENST00000561606 901 ntBASIC14.69□□□□□ -0.06
HPS1Q92902 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.69□□□□□ -0.06
HPS1Q92902 AC140113.2-201ENST00000604370 208 ntBASIC14.69□□□□□ -0.06
HPS1Q92902 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
HPS1Q92902 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HPS1Q92902 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.69□□□□□ -0.06
HPS1Q92902 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HPS1Q92902 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HPS1Q92902 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HPS1Q92902 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.69□□□□□ -0.06
HPS1Q92902 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HPS1Q92902 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HPS1Q92902 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HPS1Q92902 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
HPS1Q92902 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.69□□□□□ -0.06
HPS1Q92902 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HPS1Q92902 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HPS1Q92902 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HPS1Q92902 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HPS1Q92902 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
HPS1Q92902 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HPS1Q92902 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
HPS1Q92902 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.69□□□□□ -0.06
HPS1Q92902 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
HPS1Q92902 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
HPS1Q92902 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
HPS1Q92902 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
HPS1Q92902 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HPS1Q92902 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HPS1Q92902 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.68□□□□□ -0.06
HPS1Q92902 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.68□□□□□ -0.06
HPS1Q92902 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HPS1Q92902 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC14.68□□□□□ -0.06
HPS1Q92902 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
HPS1Q92902 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HPS1Q92902 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.68□□□□□ -0.06
HPS1Q92902 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HPS1Q92902 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
HPS1Q92902 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC14.68□□□□□ -0.06
HPS1Q92902 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HPS1Q92902 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HPS1Q92902 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HPS1Q92902 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.68□□□□□ -0.06
HPS1Q92902 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HPS1Q92902 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.68□□□□□ -0.06
HPS1Q92902 KRT18P3-201ENST00000451602 1288 ntBASIC14.68□□□□□ -0.06
HPS1Q92902 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HPS1Q92902 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.68□□□□□ -0.06
HPS1Q92902 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
HPS1Q92902 RNA5SP416-201ENST00000516838 111 ntBASIC14.68□□□□□ -0.06
HPS1Q92902 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.68□□□□□ -0.06
HPS1Q92902 PGAM5P1-201ENST00000518923 814 ntBASIC14.68□□□□□ -0.06
HPS1Q92902 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.68□□□□□ -0.06
HPS1Q92902 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.68□□□□□ -0.06
HPS1Q92902 AC040169.1-201ENST00000565382 521 ntBASIC14.68□□□□□ -0.06
HPS1Q92902 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.68□□□□□ -0.06
HPS1Q92902 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.68□□□□□ -0.06
HPS1Q92902 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.68□□□□□ -0.06
HPS1Q92902 AL356488.2-201ENST00000602755 427 ntBASIC14.68□□□□□ -0.06
HPS1Q92902 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
HPS1Q92902 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
HPS1Q92902 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
HPS1Q92902 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.68□□□□□ -0.06
HPS1Q92902 DKFZP434A062-201ENST00000573103 5021 ntBASIC14.68□□□□□ -0.06
HPS1Q92902 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.68□□□□□ -0.06
HPS1Q92902 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HPS1Q92902 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HPS1Q92902 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.68□□□□□ -0.06
HPS1Q92902 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HPS1Q92902 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HPS1Q92902 LINC00552-201ENST00000625151 2579 ntBASIC14.68□□□□□ -0.06
HPS1Q92902 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HPS1Q92902 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.68□□□□□ -0.06
HPS1Q92902 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
HPS1Q92902 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
HPS1Q92902 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms