Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CCDC107Q8WV48 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
CCDC107Q8WV48 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC13.84□□□□□ -0.19
CCDC107Q8WV48 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC107Q8WV48 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.84□□□□□ -0.19
CCDC107Q8WV48 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.84□□□□□ -0.19
CCDC107Q8WV48 MIR4751-201ENST00000578027 74 ntBASIC13.84□□□□□ -0.19
CCDC107Q8WV48 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC13.84□□□□□ -0.19
CCDC107Q8WV48 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC107Q8WV48 AC117500.6-201ENST00000624871 588 ntBASIC13.84□□□□□ -0.19
CCDC107Q8WV48 FAM215A-202ENST00000632077 792 ntBASIC13.84□□□□□ -0.19
CCDC107Q8WV48 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC107Q8WV48 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC107Q8WV48 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC107Q8WV48 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.84□□□□□ -0.19
CCDC107Q8WV48 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC107Q8WV48 SNX18-202ENST00000343017 3140 ntBASIC13.84□□□□□ -0.19
CCDC107Q8WV48 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC107Q8WV48 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.84□□□□□ -0.19
CCDC107Q8WV48 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC13.84□□□□□ -0.19
CCDC107Q8WV48 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.84□□□□□ -0.19
CCDC107Q8WV48 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.84□□□□□ -0.19
CCDC107Q8WV48 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC107Q8WV48 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC107Q8WV48 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC107Q8WV48 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC107Q8WV48 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC107Q8WV48 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
CCDC107Q8WV48 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC107Q8WV48 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CCDC107Q8WV48 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
CCDC107Q8WV48 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCDC107Q8WV48 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC13.83□□□□□ -0.19
CCDC107Q8WV48 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CCDC107Q8WV48 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC13.83□□□□□ -0.19
CCDC107Q8WV48 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCDC107Q8WV48 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
CCDC107Q8WV48 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCDC107Q8WV48 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CCDC107Q8WV48 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.83□□□□□ -0.19
CCDC107Q8WV48 AC023908.3-201ENST00000564211 3047 ntBASIC13.83□□□□□ -0.19
CCDC107Q8WV48 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.83□□□□□ -0.2
CCDC107Q8WV48 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 OR7E47P-204ENST00000575924 449 ntBASIC13.83□□□□□ -0.2
CCDC107Q8WV48 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 AL049840.3-201ENST00000602669 611 ntBASIC13.83□□□□□ -0.2
CCDC107Q8WV48 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 AL031008.1-201ENST00000619963 541 ntBASIC13.83□□□□□ -0.2
CCDC107Q8WV48 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
CCDC107Q8WV48 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CCDC107Q8WV48 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms