Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC9.72□□□□□ -0.85
SVIPQ8NHG7 ULK4-201ENST00000301831 4613 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 GABBR1-203ENST00000377012 4104 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 ASS1-201ENST00000352480 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 GLT8D2-202ENST00000546436 1578 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 AL162391.1-201ENST00000419853 2102 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 RIPOR3-201ENST00000045083 4279 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 ABCF2-201ENST00000222388 2185 ntTSL 5 BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 DNMT1-203ENST00000540357 4916 ntTSL 5 BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 ASIC1-208ENST00000552438 3327 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 PABPC1L-207ENST00000372824 2223 ntTSL 2 BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 MICU1-211ENST00000635239 2215 ntTSL 5 BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 SCAMP5-201ENST00000361900 3427 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 ANO6-203ENST00000425752 3558 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 AC024896.1-201ENST00000500632 2549 ntTSL 5 BASIC9.71□□□□□ -0.85
SVIPQ8NHG7 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SVIPQ8NHG7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
SVIPQ8NHG7 C10orf128-202ENST00000374151 1971 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
SVIPQ8NHG7 TSPEAR-204ENST00000614657 4027 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SVIPQ8NHG7 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SVIPQ8NHG7 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SVIPQ8NHG7 AL133245.1-201ENST00000608925 1365 ntBASIC9.71□□□□□ -0.86
SVIPQ8NHG7 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SVIPQ8NHG7 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.86
SVIPQ8NHG7 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SVIPQ8NHG7 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
SVIPQ8NHG7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC9.71□□□□□ -0.86
SVIPQ8NHG7 ST5-201ENST00000313726 4507 ntAPPRIS P4 TSL 1 (best) BASIC9.71□□□□□ -0.86
SVIPQ8NHG7 N4BP2L1-202ENST00000380130 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SVIPQ8NHG7 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
SVIPQ8NHG7 EZR-201ENST00000337147 3068 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.86
SVIPQ8NHG7 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SVIPQ8NHG7 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
SVIPQ8NHG7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
SVIPQ8NHG7 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
SVIPQ8NHG7 TRPC2-201ENST00000451043 3173 ntBASIC9.71□□□□□ -0.86
SVIPQ8NHG7 AC100827.4-201ENST00000563464 2441 ntBASIC9.71□□□□□ -0.86
SVIPQ8NHG7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC9.71□□□□□ -0.86
SVIPQ8NHG7 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC9.71□□□□□ -0.86
SVIPQ8NHG7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC9.71□□□□□ -0.86
SVIPQ8NHG7 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC9.71□□□□□ -0.86
SVIPQ8NHG7 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
SVIPQ8NHG7 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
SVIPQ8NHG7 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 CHMP2B-201ENST00000263780 2557 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 AC090241.3-201ENST00000621730 2599 ntBASIC9.7□□□□□ -0.86
SVIPQ8NHG7 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 AC087742.1-201ENST00000575880 1738 ntBASIC9.7□□□□□ -0.86
SVIPQ8NHG7 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 NPEPPS-201ENST00000322157 4353 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 EPHA5-205ENST00000613740 8355 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 ARHGEF26-205ENST00000496710 3781 ntTSL 2 BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 F11-202ENST00000264692 1916 ntTSL 2 BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 GOLGA8O-201ENST00000509311 1997 ntAPPRIS P2 TSL 5 BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 SLC7A7-202ENST00000397528 2098 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 SLC7A7-203ENST00000397529 2094 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 AL109954.1-202ENST00000564051 2148 ntBASIC9.7□□□□□ -0.86
SVIPQ8NHG7 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 FAM90A24P-201ENST00000520792 2369 ntBASIC9.7□□□□□ -0.86
SVIPQ8NHG7 AP003080.1-201ENST00000527374 2371 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 PSME3-201ENST00000293362 3144 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
SVIPQ8NHG7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms