RNA–Protein interactions for RNA: ENST00000377012.8

GABBR1-203, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GABBR1, Length 4,104 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-203ENST00000377012 NISCHQ9Y2I1 1504 aa22.97■■□□□ 1.27
GABBR1-203ENST00000377012 DCAF8L2P0C7V8 631 aa21.51■■□□□ 1.03
GABBR1-203ENST00000377012 SHROOM4Q9ULL8 1493 aa21.28■■□□□ 1
GABBR1-203ENST00000377012 SUPT5HO00267 1087 aaKnown RBP21.21■□□□□ 0.99
GABBR1-203ENST00000377012 EHMT2Q96KQ7 1210 aa20.16■□□□□ 0.82
GABBR1-203ENST00000377012 PCGF6Q9BYE7 350 aa19.99■□□□□ 0.79
GABBR1-203ENST00000377012 FAM9AQ8IZU1 332 aaPredicted RBP19.86■□□□□ 0.77
GABBR1-203ENST00000377012 CHIC1Q5VXU3 224 aa19.74■□□□□ 0.75
GABBR1-203ENST00000377012 LOC105371045A0A1W2PR82 267 aa19.61■□□□□ 0.73
GABBR1-203ENST00000377012 TRIM41Q8WV44 630 aa19.5■□□□□ 0.71
GABBR1-203ENST00000377012 TTBK1Q5TCY1 1321 aaPredicted RBP19.45■□□□□ 0.7
GABBR1-203ENST00000377012 HRCP23327 699 aa19.4■□□□□ 0.7
GABBR1-203ENST00000377012 PPARGC1BQ86YN6 1023 aaKnown RBP19.36■□□□□ 0.69
GABBR1-203ENST00000377012 ZCCHC6Q5VYS8 1495 aaKnown RBP19.22■□□□□ 0.67
GABBR1-203ENST00000377012 TRIM26Q12899 539 aaPredicted RBP19.12■□□□□ 0.65
GABBR1-203ENST00000377012 RANGAP1P46060 587 aaPredicted RBP19.05■□□□□ 0.64
GABBR1-203ENST00000377012 MYO15BQ96JP2 1530 aa19.03■□□□□ 0.64
GABBR1-203ENST00000377012 CCER1Q8TC90 406 aaPredicted RBP18.97■□□□□ 0.63
GABBR1-203ENST00000377012 ABCC9O60706 1549 aa18.93■□□□□ 0.62
GABBR1-203ENST00000377012 UBTFP17480 764 aaKnown RBP18.91■□□□□ 0.62
GABBR1-203ENST00000377012 ZEB1P37275 1124 aaPredicted RBP18.89■□□□□ 0.62
GABBR1-203ENST00000377012 CCDC180Q9P1Z9 1646 aa18.82■□□□□ 0.6
GABBR1-203ENST00000377012 APLP2Q06481 763 aa18.8■□□□□ 0.6
GABBR1-203ENST00000377012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.72■□□□□ 0.59
GABBR1-203ENST00000377012 SCRIBQ14160 1630 aa18.69■□□□□ 0.58
GABBR1-203ENST00000377012 PABPN1Q86U42 306 aaKnown RBP eCLIP18.64■□□□□ 0.58
GABBR1-203ENST00000377012 YTHDC1Q96MU7 727 aaKnown RBP18.55■□□□□ 0.56
GABBR1-203ENST00000377012 HNRNPUL2Q1KMD3 747 aaKnown RBP18.52■□□□□ 0.56
GABBR1-203ENST00000377012 DCAF1Q9Y4B6 1507 aa18.51■□□□□ 0.55
GABBR1-203ENST00000377012 RSF1Q96T23 1441 aaPredicted RBP18.47■□□□□ 0.55
GABBR1-203ENST00000377012 CENPBP07199 599 aaPredicted RBP18.43■□□□□ 0.54
GABBR1-203ENST00000377012 ATP1B4Q9UN42 357 aaPredicted RBP18.41■□□□□ 0.54
GABBR1-203ENST00000377012 PELP1Q8IZL8 1130 aaKnown RBP18.38■□□□□ 0.53
GABBR1-203ENST00000377012 ITGAEP38570 1179 aa18.33■□□□□ 0.52
GABBR1-203ENST00000377012 DIEXFQ68CQ4 756 aaKnown RBP18.29■□□□□ 0.52
GABBR1-203ENST00000377012 CECR2Q9BXF3 1484 aa18.24■□□□□ 0.51
GABBR1-203ENST00000377012 CSRNP3Q8WYN3 585 aa18.22■□□□□ 0.51
GABBR1-203ENST00000377012 RB1CC1Q8TDY2 1594 aa18.12■□□□□ 0.49
GABBR1-203ENST00000377012 GTF3C3Q9Y5Q9 886 aa18.04■□□□□ 0.48
GABBR1-203ENST00000377012 MROH2BQ7Z745 1585 aa18■□□□□ 0.47
GABBR1-203ENST00000377012 ZNF316A6NFI3 1004 aaPredicted RBP17.95■□□□□ 0.46
GABBR1-203ENST00000377012 SCAF1Q9H7N4 1312 aaKnown RBP17.94■□□□□ 0.46
GABBR1-203ENST00000377012 ACIN1Q9UKV3 1341 aaKnown RBP17.93■□□□□ 0.46
GABBR1-203ENST00000377012 NEUROD1Q13562 356 aa17.91■□□□□ 0.46
GABBR1-203ENST00000377012 NACADO15069 1562 aa17.9■□□□□ 0.46
GABBR1-203ENST00000377012 MYT1Q01538 1121 aa17.88■□□□□ 0.45
GABBR1-203ENST00000377012 CEP162Q5TB80 1403 aa17.87■□□□□ 0.45
GABBR1-203ENST00000377012 FAM50AQ14320 339 aaKnown RBP17.84■□□□□ 0.45
GABBR1-203ENST00000377012 P3H3Q8IVL6 736 aa17.84■□□□□ 0.45
GABBR1-203ENST00000377012 SOGA1O94964 1423 aa17.84■□□□□ 0.45
GABBR1-203ENST00000377012 WIZO95785 1651 aa17.8■□□□□ 0.44
GABBR1-203ENST00000377012 ABCC8Q09428 1581 aa17.8■□□□□ 0.44
GABBR1-203ENST00000377012 CCDC88BA6NC98 1476 aa17.76■□□□□ 0.43
GABBR1-203ENST00000377012 BAZ1AQ9NRL2 1556 aaPredicted RBP17.73■□□□□ 0.43
GABBR1-203ENST00000377012 CLIP1P30622 1438 aa17.71■□□□□ 0.43
GABBR1-203ENST00000377012 WRNQ14191 1432 aaPredicted RBP eCLIP17.7■□□□□ 0.42
GABBR1-203ENST00000377012 MIER1Q8N108 512 aa17.69■□□□□ 0.42
GABBR1-203ENST00000377012 CNGB1Q14028 1251 aaPredicted RBP17.68■□□□□ 0.42
GABBR1-203ENST00000377012 TNIKQ9UKE5 1360 aa17.68■□□□□ 0.42
GABBR1-203ENST00000377012 GOLGA3Q08378 1498 aa17.63■□□□□ 0.41
GABBR1-203ENST00000377012 NEFLP07196 543 aa17.63■□□□□ 0.41
GABBR1-203ENST00000377012 BCANQ96GW7 911 aa17.61■□□□□ 0.41
GABBR1-203ENST00000377012 RUSC2Q8N2Y8 1516 aa17.58■□□□□ 0.4
GABBR1-203ENST00000377012 ARID3CA6NKF2 412 aa17.57■□□□□ 0.4
GABBR1-203ENST00000377012 EEA1Q15075 1411 aa17.56■□□□□ 0.4
GABBR1-203ENST00000377012 POLR3GLQ9BT43 218 aa17.56■□□□□ 0.4
GABBR1-203ENST00000377012 BAZ1BQ9UIG0 1483 aaKnown RBP17.51■□□□□ 0.39
GABBR1-203ENST00000377012 HIRIP3Q9BW71 556 aaPredicted RBP17.48■□□□□ 0.39
GABBR1-203ENST00000377012 TRIM52Q96A61 297 aa17.47■□□□□ 0.39
GABBR1-203ENST00000377012 CEP164Q9UPV0 1460 aa17.47■□□□□ 0.39
GABBR1-203ENST00000377012 DDX10Q13206 875 aaKnown RBP17.44■□□□□ 0.38
GABBR1-203ENST00000377012 TOP2AP11388 1531 aaKnown RBP17.43■□□□□ 0.38
GABBR1-203ENST00000377012 KANK4Q5T7N3 995 aaPredicted RBP17.4■□□□□ 0.38
GABBR1-203ENST00000377012 ERICH6Q7L0X2 663 aa17.35■□□□□ 0.37
GABBR1-203ENST00000377012 SMARCA4P51532 1647 aa17.34■□□□□ 0.37
GABBR1-203ENST00000377012 ANP32CO43423 234 aa17.33■□□□□ 0.36
GABBR1-203ENST00000377012 MYT1LQ9UL68 1186 aa17.32■□□□□ 0.36
GABBR1-203ENST00000377012 VPS8Q8N3P4 1428 aa17.31■□□□□ 0.36
GABBR1-203ENST00000377012 CHIC2Q9UKJ5 165 aa17.3■□□□□ 0.36
GABBR1-203ENST00000377012 RAPGEF2Q9Y4G8 1499 aa17.29■□□□□ 0.36
GABBR1-203ENST00000377012 ZNF326Q5BKZ1 582 aaKnown RBP17.29■□□□□ 0.36
GABBR1-203ENST00000377012 SIN3AQ96ST3 1273 aa17.29■□□□□ 0.36
GABBR1-203ENST00000377012 SMARCA2P51531 1590 aa17.28■□□□□ 0.36
GABBR1-203ENST00000377012 KIF27Q86VH2 1401 aa17.27■□□□□ 0.36
GABBR1-203ENST00000377012 FBLN2P98095 1184 aa17.25■□□□□ 0.35
GABBR1-203ENST00000377012 FKBP8Q14318 412 aa17.23■□□□□ 0.35
GABBR1-203ENST00000377012 ATAD2BQ9ULI0 1458 aa17.2■□□□□ 0.34
GABBR1-203ENST00000377012 TONSLQ96HA7 1378 aa17.19■□□□□ 0.34
GABBR1-203ENST00000377012 CCNB3Q8WWL7 1395 aa17.16■□□□□ 0.34
GABBR1-203ENST00000377012 RRP7BPQ9NSQ0 103 aa17.15■□□□□ 0.34
GABBR1-203ENST00000377012 ZNF777Q9ULD5 760 aaPredicted RBP17.15■□□□□ 0.34
GABBR1-203ENST00000377012 CUX2O14529 1486 aa17.15■□□□□ 0.34
GABBR1-203ENST00000377012 MTUS2Q5JR59 1369 aa17.14■□□□□ 0.33
GABBR1-203ENST00000377012 CARMIL1Q5VZK9 1371 aa17.1■□□□□ 0.33
GABBR1-203ENST00000377012 HNRNPUQ00839 825 aaKnown RBP eCLIP17.1■□□□□ 0.33
GABBR1-203ENST00000377012 IRX6P78412 446 aaPredicted RBP17.07■□□□□ 0.32
GABBR1-203ENST00000377012 FAM9BQ8IZU0 186 aa17.04■□□□□ 0.32
GABBR1-203ENST00000377012 KCNH8Q96L42 1107 aa17.03■□□□□ 0.32
GABBR1-203ENST00000377012 SENP3-EIF4A1A0A087X0R7 540 aa17.03■□□□□ 0.32
GABBR1-203ENST00000377012 CLSPNQ9HAW4 1339 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms