RNA–Protein interactions for RNA: ENST00000293362.7

PSME3-201, Transcript of proteasome activator subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PSME3, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-201ENST00000293362 NISCHQ9Y2I1 1504 aa21.95■■□□□ 1.1
PSME3-201ENST00000293362 DCAF8L2P0C7V8 631 aa18.77■□□□□ 0.6
PSME3-201ENST00000293362 SHROOM4Q9ULL8 1493 aa18.74■□□□□ 0.59
PSME3-201ENST00000293362 CCDC180Q9P1Z9 1646 aa18.69■□□□□ 0.58
PSME3-201ENST00000293362 ZCCHC6Q5VYS8 1495 aaKnown RBP18.44■□□□□ 0.54
PSME3-201ENST00000293362 SUPT5HO00267 1087 aaKnown RBP18.18■□□□□ 0.5
PSME3-201ENST00000293362 ABCC9O60706 1549 aa18.06■□□□□ 0.48
PSME3-201ENST00000293362 DCAF1Q9Y4B6 1507 aa17.84■□□□□ 0.45
PSME3-201ENST00000293362 SCRIBQ14160 1630 aa17.71■□□□□ 0.43
PSME3-201ENST00000293362 NACADO15069 1562 aa17.47■□□□□ 0.39
PSME3-201ENST00000293362 MYO15BQ96JP2 1530 aa17.47■□□□□ 0.39
PSME3-201ENST00000293362 RB1CC1Q8TDY2 1594 aa17.32■□□□□ 0.36
PSME3-201ENST00000293362 CHIC1Q5VXU3 224 aa17.3■□□□□ 0.36
PSME3-201ENST00000293362 PABPN1Q86U42 306 aaKnown RBP eCLIP17.3■□□□□ 0.36
PSME3-201ENST00000293362 CECR2Q9BXF3 1484 aa17.29■□□□□ 0.36
PSME3-201ENST00000293362 RSF1Q96T23 1441 aaPredicted RBP17.27■□□□□ 0.36
PSME3-201ENST00000293362 MROH2BQ7Z745 1585 aa17.12■□□□□ 0.33
PSME3-201ENST00000293362 UNC13AQ9UPW8 1703 aa17.02■□□□□ 0.32
PSME3-201ENST00000293362 WIZO95785 1651 aa16.99■□□□□ 0.31
PSME3-201ENST00000293362 LOC105371045A0A1W2PR82 267 aa16.92■□□□□ 0.3
PSME3-201ENST00000293362 BICRAQ9NZM4 1560 aa16.89■□□□□ 0.29
PSME3-201ENST00000293362 EHMT2Q96KQ7 1210 aa16.88■□□□□ 0.29
PSME3-201ENST00000293362 FAM9AQ8IZU1 332 aaPredicted RBP16.88■□□□□ 0.29
PSME3-201ENST00000293362 TRIM41Q8WV44 630 aa16.87■□□□□ 0.29
PSME3-201ENST00000293362 BAZ1AQ9NRL2 1556 aaPredicted RBP16.86■□□□□ 0.29
PSME3-201ENST00000293362 SMARCA4P51532 1647 aa16.79■□□□□ 0.28
PSME3-201ENST00000293362 CCDC88BA6NC98 1476 aa16.66■□□□□ 0.26
PSME3-201ENST00000293362 TOP2AP11388 1531 aaKnown RBP16.62■□□□□ 0.25
PSME3-201ENST00000293362 SMARCA2P51531 1590 aa16.55■□□□□ 0.24
PSME3-201ENST00000293362 SLC24A1O60721 1099 aa16.53■□□□□ 0.24
PSME3-201ENST00000293362 ATAD2BQ9ULI0 1458 aa16.53■□□□□ 0.24
PSME3-201ENST00000293362 ABCC8Q09428 1581 aa16.52■□□□□ 0.24
PSME3-201ENST00000293362 BAZ1BQ9UIG0 1483 aaKnown RBP16.48■□□□□ 0.23
PSME3-201ENST00000293362 PCGF6Q9BYE7 350 aa16.44■□□□□ 0.22
PSME3-201ENST00000293362 EIF4G1Q04637 1599 aaKnown RBP16.4■□□□□ 0.22
PSME3-201ENST00000293362 PEG3Q9GZU2 1588 aa16.38■□□□□ 0.21
PSME3-201ENST00000293362 SOGA1O94964 1423 aa16.31■□□□□ 0.2
PSME3-201ENST00000293362 PPARGC1BQ86YN6 1023 aaKnown RBP16.31■□□□□ 0.2
PSME3-201ENST00000293362 RUSC2Q8N2Y8 1516 aa16.26■□□□□ 0.19
PSME3-201ENST00000293362 WRNQ14191 1432 aaPredicted RBP eCLIP16.25■□□□□ 0.19
PSME3-201ENST00000293362 NCAPD3P42695 1498 aa16.23■□□□□ 0.19
PSME3-201ENST00000293362 UBTFP17480 764 aaKnown RBP16.19■□□□□ 0.18
PSME3-201ENST00000293362 TTBK1Q5TCY1 1321 aaPredicted RBP16.18■□□□□ 0.18
PSME3-201ENST00000293362 RANGAP1P46060 587 aaPredicted RBP16.17■□□□□ 0.18
PSME3-201ENST00000293362 CSRNP3Q8WYN3 585 aa16.17■□□□□ 0.18
PSME3-201ENST00000293362 SYNJ1O43426 1573 aa16.15■□□□□ 0.18
PSME3-201ENST00000293362 DNAJC5BQ9UF47 199 aa16.14■□□□□ 0.17
PSME3-201ENST00000293362 CC2D2AQ9P2K1 1620 aa16.12■□□□□ 0.17
PSME3-201ENST00000293362 HMGXB3Q12766 1538 aa16.12■□□□□ 0.17
PSME3-201ENST00000293362 TRIM26Q12899 539 aaPredicted RBP16.06■□□□□ 0.16
PSME3-201ENST00000293362 CFTRP13569 1480 aa16■□□□□ 0.15
PSME3-201ENST00000293362 CADPSQ9ULU8 1353 aa15.97■□□□□ 0.15
PSME3-201ENST00000293362 CEP162Q5TB80 1403 aa15.96■□□□□ 0.15
PSME3-201ENST00000293362 HRCP23327 699 aa15.95■□□□□ 0.14
PSME3-201ENST00000293362 NESP48681 1621 aa15.94■□□□□ 0.14
PSME3-201ENST00000293362 CUX1P39880 1505 aa15.94■□□□□ 0.14
PSME3-201ENST00000293362 EEA1Q15075 1411 aa15.93■□□□□ 0.14
PSME3-201ENST00000293362 TOP2BQ02880 1626 aa15.91■□□□□ 0.14
PSME3-201ENST00000293362 TNIKQ9UKE5 1360 aa15.9■□□□□ 0.14
PSME3-201ENST00000293362 GOLGA3Q08378 1498 aa15.89■□□□□ 0.13
PSME3-201ENST00000293362 RAPGEF2Q9Y4G8 1499 aa15.89■□□□□ 0.13
PSME3-201ENST00000293362 CEP164Q9UPV0 1460 aa15.84■□□□□ 0.13
PSME3-201ENST00000293362 FANCD2Q9BXW9 1451 aa15.81■□□□□ 0.12
PSME3-201ENST00000293362 BIVM-ERCC5R4GMW8 1640 aa15.8■□□□□ 0.12
PSME3-201ENST00000293362 CUX2O14529 1486 aa15.78■□□□□ 0.12
PSME3-201ENST00000293362 CLIP1P30622 1438 aa15.77■□□□□ 0.12
PSME3-201ENST00000293362 KIF27Q86VH2 1401 aa15.77■□□□□ 0.12
PSME3-201ENST00000293362 FGD5Q6ZNL6 1462 aa15.76■□□□□ 0.11
PSME3-201ENST00000293362 RAD54L2Q9Y4B4 1467 aa15.73■□□□□ 0.11
PSME3-201ENST00000293362 KIF21BO75037 1637 aa15.72■□□□□ 0.11
PSME3-201ENST00000293362 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.7■□□□□ 0.1
PSME3-201ENST00000293362 IGF1RP08069 1367 aa15.69■□□□□ 0.1
PSME3-201ENST00000293362 PRXQ9BXM0 1461 aa15.68■□□□□ 0.1
PSME3-201ENST00000293362 APLP2Q06481 763 aa15.66■□□□□ 0.1
PSME3-201ENST00000293362 P3H3Q8IVL6 736 aa15.66■□□□□ 0.1
PSME3-201ENST00000293362 PRDM2Q13029 1718 aa15.64■□□□□ 0.09
PSME3-201ENST00000293362 TOPBP1Q92547 1522 aa15.64■□□□□ 0.09
PSME3-201ENST00000293362 TDRD9Q8NDG6 1382 aaKnown RBP15.63■□□□□ 0.09
PSME3-201ENST00000293362 CARMIL1Q5VZK9 1371 aa15.62■□□□□ 0.09
PSME3-201ENST00000293362 POLA1P09884 1462 aaPredicted RBP15.62■□□□□ 0.09
PSME3-201ENST00000293362 URB2Q14146 1524 aaKnown RBP15.6■□□□□ 0.09
PSME3-201ENST00000293362 HNRNPUL2Q1KMD3 747 aaKnown RBP15.6■□□□□ 0.09
PSME3-201ENST00000293362 PDS5BQ9NTI5 1447 aa15.58■□□□□ 0.09
PSME3-201ENST00000293362 ATP1B4Q9UN42 357 aaPredicted RBP15.58■□□□□ 0.08
PSME3-201ENST00000293362 VPS8Q8N3P4 1428 aa15.58■□□□□ 0.08
PSME3-201ENST00000293362 DNMBPQ6XZF7 1577 aa15.56■□□□□ 0.08
PSME3-201ENST00000293362 CCER1Q8TC90 406 aaPredicted RBP15.56■□□□□ 0.08
PSME3-201ENST00000293362 LAMC3Q9Y6N6 1575 aa15.56■□□□□ 0.08
PSME3-201ENST00000293362 KANK4Q5T7N3 995 aaPredicted RBP15.54■□□□□ 0.08
PSME3-201ENST00000293362 ERICH3Q5RHP9 1530 aa15.54■□□□□ 0.08
PSME3-201ENST00000293362 ARAP1Q96P48 1450 aa15.54■□□□□ 0.08
PSME3-201ENST00000293362 KIF21AQ7Z4S6 1674 aa15.51■□□□□ 0.07
PSME3-201ENST00000293362 ABCA10Q8WWZ4 1543 aa15.48■□□□□ 0.07
PSME3-201ENST00000293362 ARHGAP35Q9NRY4 1499 aa15.48■□□□□ 0.07
PSME3-201ENST00000293362 ITGAEP38570 1179 aa15.43■□□□□ 0.06
PSME3-201ENST00000293362 AQRO60306 1485 aaKnown RBP eCLIP15.43■□□□□ 0.064e-7■■■■□ 21.8
PSME3-201ENST00000293362 GAPVD1Q14C86 1478 aa15.41■□□□□ 0.06
PSME3-201ENST00000293362 ZEB1P37275 1124 aaPredicted RBP15.4■□□□□ 0.06
PSME3-201ENST00000293362 FHOD3Q2V2M9 1422 aa15.38■□□□□ 0.05
PSME3-201ENST00000293362 ERCC6Q03468 1493 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms