Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 TLE3-217ENST00000559574 325 ntTSL 518.44■□□□□ 0.543e-6■■□□□ 11.7
RPS3P23396 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.34■□□□□ 0.533e-6■■□□□ 11.7
RPS3P23396 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.473e-6■■□□□ 11.7
RPS3P23396 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.413e-6■■□□□ 11.7
RPS3P23396 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.47■□□□□ 0.232e-7■■□□□ 11.7
RPS3P23396 CCND3-216ENST00000511686 576 ntTSL 314.83□□□□□ -0.042e-7■■□□□ 11.7
RPS3P23396 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.15□□□□□ -0.142e-7■■□□□ 11.7
RPS3P23396 TLE3-225ENST00000561453 3719 ntTSL 513.51□□□□□ -0.253e-6■■□□□ 11.7
RPS3P23396 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.51□□□□□ -0.252e-7■■□□□ 11.7
RPS3P23396 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.33e-6■■□□□ 11.7
RPS3P23396 ATXN2L-217ENST00000565845 750 ntTSL 517.2■□□□□ 0.341e-10■■□□□ 11.7
RPS3P23396 HNRNPD-204ENST00000503822 607 ntTSL 521.4■■□□□ 1.021e-12■■□□□ 11.7
RPS3P23396 HNRNPD-207ENST00000509107 583 ntTSL 520.51■□□□□ 0.871e-12■■□□□ 11.7
RPS3P23396 SON-207ENST00000436227 5269 ntAPPRIS P1 TSL 58.09□□□□□ -1.111e-12■■□□□ 11.7
RPS3P23396 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.66□□□□□ -1.981e-12■■□□□ 11.7
RPS3P23396 PTGES3-206ENST00000537473 2939 ntTSL 213.43□□□□□ -0.261e-12■■□□□ 11.7
RPS3P23396 TJP2-205ENST00000423935 614 ntTSL 218.56■□□□□ 0.563e-6■■□□□ 11.7
RPS3P23396 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.023e-6■■□□□ 11.7
RPS3P23396 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.393e-6■■□□□ 11.7
RPS3P23396 SLC5A6-217ENST00000488743 3174 ntTSL 211.67□□□□□ -0.543e-7■■□□□ 11.7
RPS3P23396 SLC5A6-201ENST00000310574 3231 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.563e-7■■□□□ 11.7
RPS3P23396 MZT2A-204ENST00000445782 980 ntTSL 225.86■■□□□ 1.736e-8■■□□□ 11.7
RPS3P23396 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.276e-8■■□□□ 11.7
RPS3P23396 MZT2A-202ENST00000410036 382 ntTSL 517.44■□□□□ 0.386e-8■■□□□ 11.7
RPS3P23396 MZT2A-203ENST00000427024 679 ntTSL 315.99■□□□□ 0.156e-8■■□□□ 11.7
RPS3P23396 ENTPD6-215ENST00000471478 991 ntTSL 519.31■□□□□ 0.681e-6■■□□□ 11.7
RPS3P23396 ENTPD6-213ENST00000447877 932 ntTSL 518.36■□□□□ 0.531e-6■■□□□ 11.7
RPS3P23396 SARS-205ENST00000477544 694 ntTSL 210.07□□□□□ -0.82e-14■■□□□ 11.6
RPS3P23396 ATP1A1-208ENST00000488733 1728 ntTSL 220.02■□□□□ 0.794e-11■■□□□ 11.6
RPS3P23396 DARS-209ENST00000478212 892 ntTSL 22.49□□□□□ -2.016e-10■■□□□ 11.6
RPS3P23396 ATF6B-216ENST00000494022 320 ntTSL 211.99□□□□□ -0.493e-6■■□□□ 11.6
RPS3P23396 ATF6B-211ENST00000453203 425 ntTSL 511.89□□□□□ -0.513e-6■■□□□ 11.6
RPS3P23396 XRCC6-208ENST00000478914 550 ntTSL 28.41□□□□□ -1.065e-7■■□□□ 11.6
RPS3P23396 PTDSS2-203ENST00000525727 837 ntTSL 1 (best)20.7■□□□□ 0.98e-12■■□□□ 11.6
RPS3P23396 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.878e-12■■□□□ 11.6
RPS3P23396 PTDSS2-208ENST00000528617 532 ntTSL 220.35■□□□□ 0.858e-12■■□□□ 11.6
RPS3P23396 PTDSS2-207ENST00000527479 520 ntTSL 519.94■□□□□ 0.788e-12■■□□□ 11.6
RPS3P23396 PTDSS2-202ENST00000525059 1258 ntTSL 1 (best)19.74■□□□□ 0.758e-12■■□□□ 11.6
RPS3P23396 PTDSS2-204ENST00000526558 469 ntTSL 318.73■□□□□ 0.598e-12■■□□□ 11.6
RPS3P23396 PTDSS2-212ENST00000531520 890 ntTSL 318.19■□□□□ 0.58e-12■■□□□ 11.6
RPS3P23396 PTDSS2-213ENST00000532614 437 ntTSL 312.92□□□□□ -0.348e-12■■□□□ 11.6
RPS3P23396 SPTAN1-204ENST00000461855 857 ntTSL 29.93□□□□□ -0.826e-7■■□□□ 11.6
RPS3P23396 EIF4G1-234ENST00000478291 564 ntTSL 215.1■□□□□ 0.019e-11■■□□□ 11.6
RPS3P23396 EIF4G1-211ENST00000422614 750 ntTSL 510.16□□□□□ -0.781e-7■■□□□ 11.6
RPS3P23396 POLR2E-202ENST00000585838 487 ntTSL 510.45□□□□□ -0.742e-6■■□□□ 11.6
RPS3P23396 COLGALT1-203ENST00000597075 737 ntTSL 216.85■□□□□ 0.291e-6■■□□□ 11.6
RPS3P23396 PCK2-213ENST00000560657 559 ntTSL 317.41■□□□□ 0.388e-10■■□□□ 11.6
RPS3P23396 PCK2-210ENST00000559584 666 ntTSL 59.58□□□□□ -0.888e-10■■□□□ 11.6
RPS3P23396 ACSM3-206ENST00000561795 580 ntTSL 44.22□□□□□ -1.733e-8■■□□□ 11.6
RPS3P23396 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.163e-7■■□□□ 11.6
RPS3P23396 ATP6V0B-210ENST00000498208 419 ntTSL 522.06■■□□□ 1.121e-8■■□□□ 11.6
RPS3P23396 ATP6V0B-202ENST00000461670 530 ntTSL 516.76■□□□□ 0.271e-8■■□□□ 11.6
RPS3P23396 ATP6V0B-207ENST00000472505 411 ntTSL 512.76□□□□□ -0.371e-8■■□□□ 11.6
RPS3P23396 OAZ1-204ENST00000588673 780 ntTSL 319.93■□□□□ 0.782e-18■■□□□ 11.6
RPS3P23396 OAZ1-205ENST00000589361 679 ntTSL 1 (best)15.71■□□□□ 0.112e-18■■□□□ 11.6
RPS3P23396 SARS-206ENST00000482384 804 ntTSL 29.87□□□□□ -0.832e-14■■□□□ 11.6
RPS3P23396 HECTD1-215ENST00000556474 1046 ntTSL 317.47■□□□□ 0.393e-11■■□□□ 11.6
RPS3P23396 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.353e-11■■□□□ 11.6
RPS3P23396 CES2-208ENST00000566359 500 ntTSL 215.72■□□□□ 0.115e-7■■□□□ 11.6
RPS3P23396 CES2-212ENST00000570032 739 ntTSL 315.63■□□□□ 0.095e-7■■□□□ 11.6
RPS3P23396 CES2-203ENST00000561697 918 ntTSL 314.84□□□□□ -0.035e-7■■□□□ 11.6
RPS3P23396 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.211e-7■■□□□ 11.6
RPS3P23396 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC12.17□□□□□ -0.461e-7■■□□□ 11.6
RPS3P23396 SLC19A1-210ENST00000486303 708 ntTSL 219.27■□□□□ 0.687e-23■■□□□ 11.6
RPS3P23396 SLC19A1-204ENST00000427839 648 ntTSL 317.25■□□□□ 0.357e-23■■□□□ 11.6
RPS3P23396 SLC19A1-205ENST00000443742 777 ntTSL 315.26■□□□□ 0.037e-23■■□□□ 11.6
RPS3P23396 SLC19A1-211ENST00000528477 580 ntTSL 414.27□□□□□ -0.137e-23■■□□□ 11.6
RPS3P23396 PTK7-214ENST00000481946 807 ntTSL 312.96□□□□□ -0.333e-7■■□□□ 11.6
RPS3P23396 LMNA-214ENST00000478063 285 ntTSL 513.18□□□□□ -0.33e-23■■□□□ 11.6
RPS3P23396 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.592e-8■■□□□ 11.6
RPS3P23396 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.542e-8■■□□□ 11.6
RPS3P23396 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.596e-17■■□□□ 11.6
RPS3P23396 OAZ1-210ENST00000593012 1357 ntTSL 218.22■□□□□ 0.516e-17■■□□□ 11.6
RPS3P23396 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.396e-17■■□□□ 11.6
RPS3P23396 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.256e-17■■□□□ 11.6
RPS3P23396 OAZ1-201ENST00000581150 1131 ntTSL 516.53■□□□□ 0.246e-17■■□□□ 11.6
RPS3P23396 OAZ1-209ENST00000592787 857 ntTSL 215.87■□□□□ 0.136e-17■■□□□ 11.6
RPS3P23396 OAZ1-207ENST00000590943 1012 ntTSL 215.77■□□□□ 0.126e-17■■□□□ 11.6
RPS3P23396 RPL8-210ENST00000531767 570 ntTSL 515.16■□□□□ 0.027e-30■■□□□ 11.6
RPS3P23396 GRB2-207ENST00000577711 555 ntTSL 219.72■□□□□ 0.751e-6■■□□□ 11.6
RPS3P23396 PROC-202ENST00000402125 779 ntTSL 218.12■□□□□ 0.499e-9■■□□□ 11.6
RPS3P23396 AARS-206ENST00000569790 528 ntTSL 56.86□□□□□ -1.311e-8■■□□□ 11.6
RPS3P23396 FN1-215ENST00000461974 571 ntTSL 21.49□□□□□ -2.176e-70■■□□□ 11.6
RPS3P23396 ENTPD6-204ENST00000376666 2100 ntTSL 514.95□□□□□ -0.021e-6■■□□□ 11.6
RPS3P23396 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.76■□□□□ 0.593e-16■■□□□ 11.6
RPS3P23396 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.67■□□□□ 0.583e-16■■□□□ 11.6
RPS3P23396 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.37■□□□□ 0.373e-16■■□□□ 11.6
RPS3P23396 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.19□□□□□ -0.33e-16■■□□□ 11.6
RPS3P23396 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC8.61□□□□□ -1.033e-16■■□□□ 11.6
RPS3P23396 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.66□□□□□ -1.823e-16■■□□□ 11.6
RPS3P23396 THEM6-202ENST00000518798 2279 ntTSL 216.49■□□□□ 0.232e-7■■□□□ 11.6
RPS3P23396 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.225e-11■■□□□ 11.6
RPS3P23396 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.062e-6■■□□□ 11.6
RPS3P23396 NPTN-210ENST00000567198 571 ntTSL 412.51□□□□□ -0.415e-11■■□□□ 11.6
RPS3P23396 GLG1-212ENST00000567911 599 ntTSL 310.05□□□□□ -0.85e-11■■□□□ 11.6
RPS3P23396 ATP1B3-207ENST00000484727 657 ntTSL 26.02□□□□□ -1.455e-11■■□□□ 11.6
RPS3P23396 CREB3L2-202ENST00000420629 719 ntTSL 35.53□□□□□ -1.525e-11■■□□□ 11.6
RPS3P23396 PLOD2-210ENST00000495700 761 ntTSL 23.69□□□□□ -1.825e-11■■□□□ 11.6
RPS3P23396 ATP1B3-208ENST00000486782 229 ntTSL 22.71□□□□□ -1.985e-11■■□□□ 11.6
RPS3P23396 ATP1B3-209ENST00000487199 421 ntTSL 30.52□□□□□ -2.335e-11■■□□□ 11.6
Retrieved 100 of 24,271 protein–RNA pairs in 147.9 ms